Detailed information of aech_s0022.g62.t2 in Acropora echinata

Genomic Location: sc0000022_pilon:851191...904565
NR annotation: XP_044176883.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114951054 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P98167SCO-spondin OS=Bos taurus OX=9913 GN=SSPO PE=2 SV=2
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2
Q8CG65SCO-spondin OS=Mus musculus OX=10090 GN=Sspo PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF08685GONGON domainDomainInterproscan
PF07691PA14PA14 domainDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR001007DomainVWFC domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR003582DomainShKT domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR011658DomainPA14 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP