Detailed information of aech_s0023.g188.t1 in Acropora echinata

Genomic Location: sc0000023_pilon:3041766...3090880
NR annotation: XP_044183983.1, uncharacterized protein LOC114958589 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4GZT3Polycystin-2 OS=Bos taurus OX=9913 GN=PKD2 PE=2 SV=1
Q6IVV8Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1
O35245Polycystin-2 OS=Mus musculus OX=10090 GN=Pkd2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12248Methyltransf_FAFarnesoic acid 0-methyl transferaseFamilyInterproscan
PF01822WSCWSC domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF00801PKDPKD domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001024DomainPLAT/LH2 domainInterproscan
IPR022041DomainFarnesoic acid O-methyl transferaseInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR000601DomainPKD domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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