Detailed information of aech_s0024.g59.t1 in Acropora echinata

Genomic Location: sc0000024_pilon:1146450...1166438
NR annotation: XP_044180956.1, E3 ubiquitin-protein ligase MIB2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZIJ9E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus OX=9031 GN=MIB2 PE=2 SV=1
Q68LP1E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus OX=10116 GN=Mib2 PE=1 SV=2
Q86YT6E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens OX=9606 GN=MIB1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF06701MIB_HERC2Mib_herc2DomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF18346SH3_15Mind bomb SH3 repeat domainDomainInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR010606DomainMib-herc2Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR040847DomainMind bomb, SH3 repeat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10645MIB; E3 ubiquitin-protein ligase mind-bombEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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