Detailed information of aech_s0025.g34.t1 in Acropora echinata

Genomic Location: sc0000025_pilon:689531...711532
NR annotation: XP_044184806.1, LOW QUALITY PROTEIN: caskin-2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WXD9Caskin-1 OS=Homo sapiens OX=9606 GN=CASKIN1 PE=1 SV=1
Q6P9K8Caskin-1 OS=Mus musculus OX=10090 GN=Caskin1 PE=1 SV=2
Q8VHK2Caskin-1 OS=Rattus norvegicus OX=10116 GN=Caskin1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR033635FamilyAnkyrin repeat and SAM domain-containing protein 1/CaskinInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24174ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21952CASKIN, ANKS5; CASK-interacting protein-Membrane traffickingko04131deepkoala

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