Gene detail

Detailed information of aech_s0027.g84.t1 in Acropora echinata

Genomic Location: sc0000027_pilon:1493682...1498707
NR annotation: XP_044178698.1, solute carrier family 12 member 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0027.g84.t1

CCAAAGGAACTCTCTTGGCCGTTCTGATAAGTACACTGGTATATGTGATGCTTGCTTGGTTTCTTGGCGCCTGTGTGGAACGAGAAGCACTTGGCTTGGTGCATGATGCAGTGAATGCAACGAATGGATCTATAACATCTTGCGTGTCACAGAAATGTCAGTATGGGCTGCTAAATGATTTCCAGGTCATGGCAGCTGTTTCGGCATGGGGACCCATTGTGATTGCAGGCATCTTCGCCTCTACCTTGTCATCTGCACTTGCAAATCTCGTTGGAGCGCCGAAGACGTTCCAAGCAGTTTGCAGAGATCATCTCTTCCCATACATCGGCTTCTTTGGTGTTGGCTATGGTGCCGGCGAGGAGCCTCGTCGTGGCTACCTCTTGGCGTTTTTTGTCGCTGTTGCATCTATTTTGATCGGCGATCTCAATGTCATAGCGCCCATTATTTCCAATTTTTCCCTTATTGTGTATGCTCTCATTAATTACGCAGTCTTCGAGGCGTCCCTGGGTCGTTCTCCCGGATGGCGTCCTTCGTTCAAGTACTACAATATGTGGGTGTCCTTGCTAGGTGCTCTGTTGTGTATTATGATGATGTTCCTCATTAACTGGTGGGCAGCATTGGTGACTATAGTCATTGTTATTGTCTTATACAAGTACGTCGACTTCACCAAGCCACAGGTTAACTGGGGCTCCTCGTCCCAGGCTTTTTCTTTTGTTCAAGCGCTTCGCTACGCTCTTCGCCTTGAAGGGATTGAAGATCACGTAAAGAATTTTCGTCCACACTGCCTGGTACTCAGCGGCCGGCCTCAGGACAGACCTAACCTAGTCTACCTCGTGTCCCAGATAACTAAAAACGTCAGCCTGATGGTATATGGCCACGTGATGATAAGAAAACCTTTCGGTGCCTTGCCTGTAGATGAGGAAGATGAGGAAGACATTCAGTGGATGAGGGAACACAAGATGAAAGCCTTCCGAGCTGTGACTACAGCTCCTTGTCTCTGCGAAGGGGTGCGGTCCATGATGCATTTGGTCGGCCTTGGGAAGATGCGCCCGAACACTGTAGTCATGGGCTTCAAGAGGAACTGGACAGATCAGGAGAACATACATGACGTACATGACTATCTGGGCGTCATTAACGACACCTTCGAGCTCAACTACGGCTTAGTGATCCTTCGCATGGACGAAAAGCAGAAGAGAGAAATCATCGTGCAGTTAGAGGGCGATGACATTGAAAACTCCAATTCCATCTTAGACGAAGATGAGTACTCCAAGTCCAAACCACCTTCTTCTCCGGCGACGAAATCGACACAGGAAGAGAGGGAGAGCCTTACCAGCCCCGATAAACACTCTCCGGAGATTTTGGAAGACAGAGTCGAAACGTCGTTTAAGGAAAAGCAGAGGGGAACTATCGACGTTTGGTGGATATACGATGATGGCGGGCTGACTGTTTTGATACCGTACTTGCTGTCTCTTCATCGCGCCTGGAAACATTGCAAGCTCAGATTTTTCTCAGCTGATATTCGCTCGAAGCACGAGTTGTCCCCGCAAAGATTGCGCATGGCCAATCTTCTGAAGAAATTCCGCATCGATGCTAGCTGCGTGGAGCAGACAGAGGGCATCAGCAAAAAGCCATCCGAGGAAAGCATCGACGCGTTCAGGCGACTTCCCGTCGGGCAAGAACTTGGAGATGCTCCGATCGAAGACCAGAAAGTTCTAAGAACCATCCGTATAGGGGAGCTGGTGAGGCAGAACTGCACCCCAGATACGAGGCTTGTCGTCATCTCTATTCCTGTGCCAGTAACTGACGTCACCACTCCTTTGATGTACATGAGCTGGCTTGAGGTGTTATCCGCTGACCTGCCACCAACGCTGCTCGTACGAGGCAATCAGACGAATGTGCTTACATTTTATTCTTGAGGCGGGCACAGCTAATGACGGATGAACATACGTCATTTCTTGAGCTGTGACACGAATTCTCCGAAAAACGATTTCTCACACCTGAAACTCTAATCACTCCTTTTATCTCAAAGAATTTATCTTTTCTTTGAAAGCTGTGTACAAGTAATCCGGTAATACGAGTATAAATTGTGCATTTACGATCTGTTAACTCAAGGAACAACAAGGATCATGTATAAAGGGAGATGTGGAAATCAGCATAATGAGCTGATGTCATCCACAGGACGAATTTGGTAACAgagaaggttaaagaatgtaacataatgagacgagcacgtgcagagggtggaaaaagtcattgctttagtgcattaattatgtagattagtggcgttcttgtcgacgtcttcgtcgtgtttgcgtaagctcccttTAGATATCATTCTTATAAACAAGAAAACTGCTT

Protein

Uniprot

Uniprot term	Description
P55013	Solute carrier family 12 member 2 OS=Squalus acanthias OX=7797 GN=SLC12A2 PE=1 SV=1
P55011	Solute carrier family 12 member 2 OS=Homo sapiens OX=9606 GN=SLC12A2 PE=1 SV=1
P55012	Solute carrier family 12 member 2 OS=Mus musculus OX=10090 GN=Slc12a2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03522	SLC12	Solute carrier family 12	Family	Interproscan
PF00324	AA_permease	Amino acid permease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018491	Domain	SLC12A transporter, C-terminal	Interproscan
IPR004841	Domain	Amino acid permease/ SLC12A domain	Interproscan
IPR004842	Family	SLC12A transporter family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11827	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006811	Biological Process	monoatomic ion transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0006884	Biological Process	cell volume homeostasis	Interproscan
GO:0008511	Molecular Function	sodium:potassium:chloride symporter activity	Interproscan
GO:0015377	Molecular Function	chloride:monoatomic cation symporter activity	Interproscan
GO:0015379	Molecular Function	potassium:chloride symporter activity	Interproscan
GO:0035725	Biological Process	sodium ion transmembrane transport	Interproscan
GO:0055064	Biological Process	chloride ion homeostasis	Interproscan
GO:0055075	Biological Process	potassium ion homeostasis	Interproscan
GO:0055078	Biological Process	sodium ion homeostasis	Interproscan
GO:1902476	Biological Process	chloride transmembrane transport	Interproscan
GO:1990573	Biological Process	potassium ion import across plasma membrane	Interproscan