Detailed information of aech_s0027.g97.t2 in Acropora echinata

Genomic Location: sc0000027_pilon:1654089...1689917
NR annotation: XP_029198424.2, integrin alpha-6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P26007Integrin alpha-6 OS=Gallus gallus OX=9031 GN=ITGA6 PE=2 SV=1
Q63258Integrin alpha-7 OS=Rattus norvegicus OX=10116 GN=Itga7 PE=1 SV=2
Q91687Integrin alpha-4 OS=Xenopus laevis OX=8355 GN=itga4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF08441Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR000413FamilyIntegrin alpha chainInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR013649DomainIntegrin alpha, first immunoglubulin-like domainInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

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