Gene detail

Detailed information of aech_s0030.g113.t1 in Acropora echinata

Genomic Location: sc0000030_pilon:1523828...1534837
NR annotation: XP_029185107.2, LOW QUALITY PROTEIN: CD151 antigen-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0030.g113.t1

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCTGGATTGCGGAATGAGATGTTTAAAGTTTCTGCTTTGTGTCTTCAATCTTGTGTTCTGGGCCGCTGGTATTGCAGTGATGGCCGTTGGAATCTTCGCACGAGTGAGCGCCAGCAATTACTCCGCATTGATGGAAGAGGGCGGATTTAAGTCAGCCGCAAACATCTTGATTGCAGCGGGTGCTCTGGTAATGATCATTGGTGCTATTGGATGCTGTGGTGCAATGAAAGAGAAGAAATGGCTGCTTCTCTTATACGCCTTCTTAGTGATGATGATCTTTATTTTGGAAATCGCTTCTGGAATCATGGCCTACTCTCAGAGAGACAAGGTGATCGGTAGGATAGAACAAACGGTGAACAAAACCATTACGCTGGACTACGGGGAGAACGGCCAGGAGAAGCTCACAGAGGCAGTTGACAGGGTCCAACAGGAGTTGAAATGCTGTGGGGTACTAAGCCCTGCAGACTGGAAGAAGTCAAATTGGTACAAATCAACACGGAAAGGAAACAAAGAAGACACCCCCGAGTCCTGCTGCATTAAGAAGGAAGCAAAATGCAGCGCATCTGGAAACACGGATGCTATATACAAAGAAGGTTGCTCTCAAGCACTGCAAGATTTTGCTAAAAGCAAAATGGCTGTGATCGGGGGAATAGGTGTCGGGATCGCCATTTTACAGGTTCTGGGAATAATATTCGCCATCTGCTTGTACCGTTCCATTGGCTATGAGAAGATATAATTTTGAGAAATGAGGGACATATGTGTTTTGCTCAGATCAGCAAGCTTATTTTTGGCCTTGGCCCCGGAAGGGGCATTTTCTAAGAACTAAAATTGATCTGAAATTGTTTCTTTTCACAAATCAATAGATTCGCGACAGAAATTGATTACTGAAAGTTTAAGTTTGATCGTTTGTTGTAAATGCGTGGCAATAGCTTGTCTTAAAGCTGTCAATTTTTTTGTTTACGCAGGTATCCTGGCTTGTAATATTTTTATTGTCAAATATGTGACAATTTAACAACCTTAAAAAATTAGGCACGTCAAAGTAAGGGCAGAGTCAGCCATACTTATCACACTGAACCTGCCTGCGAAAAAGCTCTCTTACTGTACTAGAAGTCCATAAGCCAAAGTCTTGATATCTCCGAAGGCACTACATCACATCGGCTAAAGCCGGATTGCAGTCATCAGTGGTTTCAGCGAAAGCATGGGTTTGTGAATGGGTTTTTAATCGCGCGGGCTCAAAACACTGGCTTCAGTCGATGTTATTGAGTGCTATCGCGATGATATCTCtgtccttcgccatcagtatacggtattacctaaatttagaattagaggtcctggaaaataatggccaatcaggttgggctgatgaacacaacgcttccgattggttccaaaccaagtgaaccacatgtgggattgCCGTTggccatttcggaaaataccataatactctttgtttgtcccccaatattttgcataagcatcgtttttgttttctcttgggaccattgtaagtcccaagggaaactggaaacaacccttatgcaaaattttgggggaaaaacaaggagtatcatggtattttccgcagtggcctattaTGGTATTCACCGCGTGCGAGCAACATCCGTTCTGAAAATAGATAACaaagagttttagcaccgacgacgagtacgagtttagctcgctctcgtagttgtactcgtagtcgaaaaaataaggttaagcatacatcaacaaggagtaataaaatagtttagagttagtcaatcaagaatatatctgcttagcccactgatggcaacttgtgaaataggtgagtttaagttaagcttaaacataaacgaatttcgatcaaaagtcgggtttccaactttttaatgtttttttttttgtgtgaataaagctatgcataccaaagcaaaagaaaataaaagcaaaccaccaatagttagtctatcgagtttctgtcaagataaatctgaaagaaaagttacctgtcataaaaaaaattaaatacttcccttccttcgtttgcttgcttcatggtaagcgcgaaccggccgcggtcctagaaagcagttataacggtgccaataattccggcccatatcattgttcagcacaaaacttaaatgaatatactgtaacaatcttctaaagcgcatttaaattaagcaaagtaaattaatcgaccttctttgccttctcggtcggaggtccaactcgttctcactccaaactcgtcgttcttcgaatttgagagtttgcgcatgctccttagaacttgcttccagattcgtaggcggactcgtcgttggtgctaaaactctctaATAATAGATGAACTTCTGGTTCTTCCCGAGTCCTTCAAGATTCTGTGAGATCTTGAGAGCCTGCTCGCAGTCTGTACTAAACTAACGTTCTCAAGTTCTCGATGTTCAGCACACATATATGCTTGAAGCTATGTATTCATGGATTTTTTTTTTGGCCGAAAATAATGAAACACGTTTCCATGGTGTGTTGAACTTGATTTCTGAAAGCGTTTCTTTTTCAGCCATTAGTTATTTGTTGAACTTTGGATTTTGTTGCATGATAAAAGTTCTCTCATTTG

Protein

Uniprot

Uniprot term	Description
P48509	CD151 antigen OS=Homo sapiens OX=9606 GN=CD151 PE=1 SV=3
Q3ZBH3	CD151 antigen OS=Bos taurus OX=9913 GN=CD151 PE=2 SV=1
O35566	CD151 antigen OS=Mus musculus OX=10090 GN=Cd151 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00335	Tetraspanin	Tetraspanin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008952	Homologous_superfamily	Tetraspanin, EC2 domain superfamily	Interproscan
IPR018499	Family	Tetraspanin/Peripherin	Interproscan
IPR000301	Family	Tetraspanin, animals	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19282	TETRASPANIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06537	CD151, TSPAN24; CD151 antigen	-	CD molecules	ko04090	deepkoala