Gene detail

Detailed information of aech_s0034.g18.t1 in Acropora echinata

Genomic Location: sc0000034_pilon:309253...332615
NR annotation: XP_029206486.2, non-lysosomal glucosylceramidase-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0034.g18.t1

TTGTAATATCACTTCTTTCCATTGTGACAGCAAAATGGCGACCTCTTCGACAGAAGAGGAGAGTGAAGATTCGCTTCCCAAATACGGATGGAGGGTGCATCTGGATAACACCTTTTCACACAAGCCCCAACCCTGTTATCTTCCAAGGTGGACCCAGATACCAAGGTTAATAGGCCTGGGATGGAGATTTATGAAGTACGCTTCAAGGGAAAGAAAGAATGGAAGAGTGCCGTTTATCGATCCCTTCGCCACAAACCCTTGTCGACAGGTTTATGGAGTTCCTCTGGGTGGAATTGGATGTGGTAGTATTGGCCGAGGATGGAAGGGAGATTTCAACAGGTGGCAACTTACCCCAGGAATGTACAATTATACATATGTAGAGGCTAATCAGTTCATTGTTTGTGTGAGGAAGAAAGGCAGAACAACTTATCAAGCAGTGTTGTCTCCAAACCGTCCTAATGGAGTTTTGTGTGGACGCAGTTTACAAGGCTGGAACTGGGGTTTTAATGGTGCACATGCCACGTACCATGCTTTGTATCCTCGTGCATGGACCATTTATTATTTGCCTGGACAGAATATTAGGCTGGTTTGCCGTCAGATCTCTCCTGTGTTTCCTAATGATTACAAGGATACCAGTCTCCCTGTTGCAGTATTTGTCTGGGAAGTGGAAAATAATAACGATGAAGAGGTGGAAGTGGCGATCATGTTTTCATTTCAAAACAGTGATGGAACTCCTAATGATGTGTCCTGCGGCCATTATAATGAGTCATTCACATGCAGACTTGGTAGTCATAGCTCTGGAGAAAACAATGTTCTTGACAAAAGAAATTCATTCAAAGGGTCTGTTAGTTCCAGTGAAGTTACTGGAGTTCTCCTTCACCATAAGCATCCATCGCAGCCTTATACATTTGGCATTGCTGCTAAAGCTCAGCATCAGGCAGGAAAGAACACCATTACTGTGACAACAAAGACTTCATTTGATGCCCAAACACCTTGTAGAAGGGTGTGGGAGGACTTGTTGGATGATGGAAAACTCAATTCTACAACAGGACCCAGTGAGCCCTCTCAACAAGAGCAAACACTTTGTGCTGCTGTGGCTGCTACAACTAAGGTAACATCCCGAGGAAAAGCAAAGCTGGAATTTTCTCTTTGTTGGGATAATCCAGTTGTCCACTTTGGATCTGCAAAGACAAAACACTACAGGTTTTATACTCGCTTCTTTGGTCGCCATGGCAATGCAAGTAAAGGGCTGTGTTGCCATGCCCTGAAGTATTATCCATTATGGGAATCGAAAATTGATGCTTGGCAGGAACCAATTTTACAAGATGACTCTTTGCCATCTTGGTACAAGTCGGCCCTGTTTAACGAGCTCTACTTTGTAGCTGATGGGGGAACAGTATGGTTAGATGTCTCCAACATCGCGGACAATAAGAAAACTCCTATCCATGATTTTGTGAAGGAATATGGCAGATTTGCCTATTTAGAAGGGCATGAATACAGAATGTACAACACCTATGATGTTCACTTTTATGCGTCATTTGCTCTCGCTTTACTTTGGCCCAAGCTGCAGCTTAGTCTTCAATACGATATCGCTCAGGCCGTAAACAAAGCGGACACTCAAGTCACGTTGACAATGATGAACGGGCGAAATTGTCGAAGAAAGGTTCCTGGCTGTGTCCCGCACGATATTGGAGATCCAGCGGATGAACCGTGGGAGAAAGTAAATGCTTATACAATTCACGATACGGCTCACTGGAAAGACCTGAATCTCAAGTTTGTTCTACAGGTATACAGGGACTACAAGATGACAAAGGATTCTACGTTTTTGCAAGACATGTGGCCTATAACGAAGACGGTAATGAGCAAAACTCTGATCTATGACACGGATGGAGATGGCCTGATAGAAAACTCCGGATTTGCGGATCAAACGTACGATGCGTGGCCAGTGACAGGACCAAGTGCTTACTGTGGAGGTCTCTGGCTGGCGGCTTTGCGAGTTATGCAAGAAATTTCTACAATCTTAGGATTCCCTGATGATGCAGCTAAATACTCTAACATCCTTGCAAACGGAAAAAAGGCCTATCACTCTTTGTTGTGGAATGGATTTTACTACAAGTATGACAGCAGCAACAGCAAGTATAGTAACAGCATCATGGCGGATCAAATGGCTGGACAGTGGTATCTGAAAGCTTGCGACCTCGCACAATCACCTACTGATCAGGTCGACACTAGTAGTCTGCAGGCAGAAGAAGTGTGGACCGGGGTAACATACGCTGTGGCTGCAGCCATGATTCAAGAGGGTCTAGTCGAGGAAGGCTTCAAAACAGCAAGCGGCATTTATAACACTTGTTTTGAAAGATTGGGAATGGGTTTCCAGACTCCTGAGGCAATTGTTGCTAATGGCAACTTCCGCTCGCTTGCTTACATGCGACCGCTTAGCATCTGGGCCATGCAGTGGGCGCTGGAGAACAGACATAAACCGGATGAAATGCCTGTCACTCAAGATGATACCGCTGGCTCTTGTAAAGAACTTATTCAGAACAATGGTGTCCGTAAAGTATCCGATGATGGTTAAGTTCAAGACAAGAAGAAATAATGATCAATGTGCAGTTTCAGTAGAAAATCGTAATTGAATTTCTGAAGAAAATATGCACAAGATTTTTTTTCTCTAAAGTACGAAACGTACGCAAATGGCTTCTGCCAGTATCTTATTGGAACCTGGGTCGTAAAATTGGTGTATTTTTTATTTATCGTTTTTTTCACACACAGAAGAGGAACAACTGTACAGGGACGTATTTAATCGCTGTCTTAGTGTAGTTTTTTTTCTTCGCAAAAAGAAGAGTCGGAAATGTTATTTTGAAAGGGTTTGTGTCACAACTAGTGCGCATGCGCAATGTTTGAACCTGGTTTTCAAACGATTGCGATGTTGGCACTGTGAGGAAAAAGTTCTCATTCACCGTCAATCTGTGGGGCTGGTATCCGAGTGCGTGAAATGTAACTTTAATGTGCATGTCAAGTTTTCTAGGCTCGAGCATCAGCATTAAACATGCTCATTTAAGAAGGGCGGCGTAACGCTGTTGCCATACAAAGATATTTCTTTTATATTTTCATCCAGTTATGGGAAAAATATTGAGAATAGCCTTTGACAGGCCTCTATTTTATTAATGTTCACTTTTAGCTTATCAACTTCCGTAGTAAAAAGAGACTTTCAATTCTGGGAGCAATGTTTAAAACATTTCAAATTCTTGAGGAAATCGCCAGAGGGATGAGGGTTTTTACGTGACCTCACGGCTGCCTCAGAGAATTGAGTTCTATTTCCTTTTGTTTCCGAAAACCAACATGGCTTCTGCTCACGTGAAAGAAAACGGTGCGAGGAATAAAAGGGTAGCATTTGTCAAGCAACTCACAGTAATGTTTTAAAGATGTAATCGATCTTGTTTTTTATTTAGAGAATAGTATTTACAAAACCTGTACAAAGAACATGCAAGATTACTCTAATTATTGATCATGGAAATGAAAAGCATAAGTTAATTGTGGAGATATCTTTCATAGCTATTTATTACAAAAGACAGAAATGTTAATTAGAGTTAAGGGGAACTGCAGGGTTAGGGAACAGTTATTTGCCAAATACACGCGGAGTACAACA

Protein

Uniprot

Uniprot term	Description
Q5M868	Non-lysosomal glucosylceramidase OS=Rattus norvegicus OX=10116 GN=Gba2 PE=2 SV=2
Q9HCG7	Non-lysosomal glucosylceramidase OS=Homo sapiens OX=9606 GN=GBA2 PE=1 SV=2
Q69ZF3	Non-lysosomal glucosylceramidase OS=Mus musculus OX=10090 GN=Gba2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12215	Glyco_hydr_116N	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	Family	Interproscan
PF04685	DUF608	Glycosyl-hydrolase family 116, catalytic region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR024462	Domain	Glycosyl-hydrolase family 116, N-terminal	Interproscan
IPR006775	Domain	Glycosyl-hydrolase family 116, catalytic region	Interproscan
IPR052566	Family	Non-lysosomal glucosylceramidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12654	BILE ACID BETA-GLUCOSIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0008422	Molecular Function	beta-glucosidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17108	GBA2; non-lysosomal glucosylceramidase	EC:3.2.1.45	Other glycan degradation	ko00511	deepkoala