Gene detail

Detailed information of aech_s0036.g120.t1 in Acropora echinata

Genomic Location: sc0000036_pilon:1687665...1698492
NR annotation: XP_044172928.1, UBX domain-containing protein 6-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0036.g120.t1

TTCTATTAAAATTTCTTCGAAGTTTCAATGATTGTCATGAGTTAATGGGGTGAGATGCACTGGAGGACATAAATGTGCTTTGACAGACAAAACAATATTTTTATACAAGGATTTCTTCAAGAGCATTAAATGAACTGAGACTTCTCCAAGGTGTGAGGAATAATTTCCCAGGGTAGTGGACAAGCTGAGAAATGAAGAAGCTCTTTCAAAAAGCTAAGTTAGATTACAGGTTTAAAAGAGCTGGTGAAGGACATGCATTGCAAGACGAAAGCTCCACATCACAACAAAGTTCCACGCCGCAGACACCGGCTGCGAGAGCATTGCCAACTTCTGATGCACAACGGGCAGGACAGGCTGCTTTGGACAGATTTGCGAACCTTGAAAAGAATGCTGTAAAACGTCCCAAGTCGGCAACTGCAACGTGGAAACACAGTGGTTCAACAACAACATTTTCAGAGAGTTCAGATGCTGGAAATTCTTTGAACCTTGAGCAACTCAGGAAAGAAGTGAAACAAGAGATGTCAACTGAAATAGATTTTGTAATGAGAGGTGATGCGGCAAACTTACCTCAACCAGCTGTTGCTGAACCAACCCTTGTAGATTGTTCAACGGTTCAGGCTCATGAAGGAGTTTATTTCAGTTGCCCTTTATGCCCAGCATCAACTTTACTGAGTGAAAAGGACGAGCACCTTTCTGCGTGCCTTGATAAGTGTTATCTTGAGGAAGCGTTGTCAACTTCATGCGCAATGATCTACTCTCTCAATAAAGACAGCAACAAAATTAAGGCATGCGTTGATTTACTCTGCAGATACCTGGACAATATTTGCAAAAACCCAGATGAAGAAAAATTTCAAAAGATAAAAAAAAGTAACAAAGTTTTTCAGGAGCGCGTAGCCCCGATCAGGGGAGCAGTGCAATTCCTACTTGCCTGTGGTTTCGAGGACAAAGTTATTTCTGTTGAAGGTTTAGAAGAGAATTATTTTGTGATGCCAAAGGAGAAATGCTCAGACTGCGAACCATTGGAGGCGTTTAAGGAGGTTTTGCTCTCCTGTGAAGCGCTGAAACCCAAGCTGGACCGTTGTTTAAAGGTTTACAAGCCAACAAATCAGGCCAGCCATTTTGAAGTACCAAGTGACTTTTTTAGCAAGACTTCAGAAGAAATAAAACGGGCGCAAATCTCCAGAAGTGAAGAAGTTGAACGCAGTTGCCAACTAAAAACTCGAGCGATGCGCGAAGCTGAGAAGCGCCCAACGAAGATCTACCGATTTACACTGATACGAGTTCGGTTTCCCGACGGCTTTATTCTTCAAGGGACATTTTACTCGCGAGAAAAAGTTCGGGATGTTGTCGAGTTTGTTCGGCAGTCCCTCGTGTCCGATTGGCAACCGTTCCAATTGTTCGAGACTACAGGGCAACTGAAGGATGAAAACGCGTCGCTCATCGATCTTGGTTTGGTTCCTGCTGCTGTCGTGAATTTTAAATGGGACCCATTGATCATGAAAGATATCTTAGCAACTCAAGGACAAGTGGACGAAAATGTCTTTCTGAAACCTGAGCTGCTACAGCTGGTTCAAGAATTGAAATGAAAAAGCCATGAAACGGAATACAGAAGACTGTGATAATCAAACTCCGTTTGTAGGCACCATCAAGGCATTCGGACGTTTGTTTTTCGCTCAATTTGACAACCTCGTTCCCAGGGTCTCTCTGGAGCGGGGGAGAAACCAGAGAGACCCTGGGAACGAGGTTGTCAATTTGAAAGTAAAGACGAACTTCGAAGGCTTTTTTCTCGGCCACTAAGCTTGAATTTTTCGGCAGATTCACGAGTTGCTGGTAGTGATTAGTCGCTCTTCAGCGTCTTTTCTTGCTCGCCTATCGGGAAGTGAAATTTGTGCACGACAATTTTGAAGTATTACGCCGTATtaaggagtttacgcaatgacgacgacggcgttaacgagaatgtcgcaaatgttgcatatttaatgccaaaaataTTAGGAAAATATATAGTAAAATATCTTTGATCAT

Protein

Uniprot

Gene family

Uniprot term	Description
Q9BZV1	UBX domain-containing protein 6 OS=Homo sapiens OX=9606 GN=UBXN6 PE=1 SV=1
Q99PL6	UBX domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ubxn6 PE=1 SV=1
Q2KIJ6	UBX domain-containing protein 6 OS=Bos taurus OX=9913 GN=UBXN6 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|UBX

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00789	UBX	UBX domain	Domain	Interproscan
PF09409	PUB	PUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042774	Domain	UBXN6, PUB domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR001012	Domain	UBX domain	Interproscan
IPR018997	Domain	PUB domain	Interproscan
IPR036339	Homologous_superfamily	PUB-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23153	UBX-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14011	UBXN6, UBXD1; UBX domain-containing protein 6	-	Protein processing in endoplasmic reticulum	ko04141	deepkoala