Detailed information of aech_s0037.g127.t1 in Acropora echinata

Genomic Location: sc0000037_pilon:1993851...2015545
NR annotation: XP_044178539.1, ATP-dependent RNA helicase A protein-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28141ATP-dependent RNA helicase A OS=Bos taurus OX=9913 GN=DHX9 PE=1 SV=1
Q68FK8ATP-dependent RNA helicase A protein OS=Xenopus laevis OX=8355 GN=dhx9 PE=2 SV=1
Q5R874ATP-dependent RNA helicase A OS=Pongo abelii OX=9601 GN=DHX9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044446DomainDHX9, second double-stranded RNA binding domainInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR044445DomainDHX9, first double-stranded RNA binding domainInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0050684Biological Processregulation of mRNA processingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

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