Detailed information of aech_s0037.g153.t1 in Acropora echinata

Genomic Location: sc0000037_pilon:2346518...2401052
NR annotation: XP_044169481.1, rab5 GDP/GTP exchange factor-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JM13Rab5 GDP/GTP exchange factor OS=Mus musculus OX=10090 GN=Rabgef1 PE=1 SV=1
Q9UJ41Rab5 GDP/GTP exchange factor OS=Homo sapiens OX=9606 GN=RABGEF1 PE=1 SV=3
O18973Rab5 GDP/GTP exchange factor OS=Bos taurus OX=9913 GN=RABGEF1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18151DUF5601Domain of unknown function (DUF5601)DomainInterproscan
PF02204VPS9Vacuolar sorting protein 9 (VPS9) domainFamilyInterproscan
PF02374ArsA_ATPaseAnion-transporting ATPaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003123DomainVPS9 domainInterproscan
IPR041545DomainRABX5, catalytic core helical domainInterproscan
IPR025723DomainAnion-transporting ATPase-like domainInterproscan
IPR037191Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR045046FamilyVacuolar protein sorting-associated protein 9-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23101RAB GDP/GTP EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan

TOP