Gene detail

Detailed information of aech_s0038.g81.t1 in Acropora echinata

Genomic Location: sc0000038_pilon:1523877...1525014
NR annotation: XP_015778272.1, PREDICTED: TNF receptor-associated factor 1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P39428	TNF receptor-associated factor 1 OS=Mus musculus OX=10090 GN=Traf1 PE=1 SV=2
Q13077	TNF receptor-associated factor 1 OS=Homo sapiens OX=9606 GN=TRAF1 PE=1 SV=1
Q12933	TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN=TRAF2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21355	TRAF-mep_MATH	TRAF/meprin, MATH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049342	Domain	TRAF1-6/MEP1A/B-like, MATH domain	Interproscan
IPR008974	Homologous_superfamily	TRAF-like	Interproscan
IPR012227	Family	TNF receptor-associated factor TRAF, metazoa	Interproscan
IPR002083	Domain	MATH/TRAF domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0005164	Molecular Function	tumor necrosis factor receptor binding	Interproscan
GO:0009898	Cellular Component	cytoplasmic side of plasma membrane	Interproscan
GO:0033209	Biological Process	tumor necrosis factor-mediated signaling pathway	Interproscan
GO:0070534	Biological Process	protein K63-linked ubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03174	TRAF3; TNF receptor-associated factor 3	-	Alcoholic liver disease	ko04936	deepkoala