Detailed information of aech_s0039.g129.t2 in Acropora echinata

Genomic Location: sc0000039_pilon:1796118...1806912
NR annotation: XP_020620020.1, probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7RWD2Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog OS=Nematostella vectensis OX=45351 GN=v1g226592 PE=3 SV=1
Q99KN2Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus OX=10090 GN=Ciao1 PE=1 SV=1
Q5M7T1Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Rattus norvegicus OX=10116 GN=Ciao1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR028608FamilyProbable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19920WD40 PROTEIN CIAO1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0097361Cellular Componentcytosolic [4Fe-4S] assembly targeting complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24730CIAO1, CIA1; cytosolic iron-sulfur protein assembly protein CIAO1-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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