Gene detail

Detailed information of aech_s0042.g63.t1 in Acropora echinata

Genomic Location: sc0000042_pilon:1740546...1749574
NR annotation: XP_044171623.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114951401 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aech_s0042.g63.t1

ATGGGAGACCCAGCACCGAACGACGGCGAAATCCCCCCGGTTCAGGCAGATCAATTACCTGCAGCGGACGCGGAAAACCACGCACCAGCAATCGTTGCTCAACCAGCGATGGCAGTTCAAGCGGTTTCAATTGCGAACTACCAAGTTCCACCGCCAGAGAAATTTAGCTTCAAACCAGAGGATTGGACACGTTGGATTCGACGCTTCGAAAGATTTCGAAAAGCAACTGGTCTGGATCAAAAAAGCGGCGAAAACCAAGTGAACACCTTAGTTTACTCGATGGGCGAAGAAGTAGACGACATAATGGTCACGTTTGGACTCACTGCAGACGATGCAAGACAGTACGAGCTAGTCAAGAACGGGTTTGAGAGTCATTTCATTGTCAAGAGGAACATTATATTCGAGAGAGCTAAGTTTAACCTCAGAAGTCAACAAGAAGGTGAGTCAGTTGAAACCTTCATTACTGATTTACATTGTCTCGCGGAACACTGTGAATTTGGCGTATTAAAGCACGAACTTATCCGAGATAGGATAGTTGTGGGGTTTAAAGATAAGAAACTGTCTGAAAAACTGCAGTTAGATTCTAAATTGACTCTGGAGAAGGCAGTAACCCAGGCCAGGCAATCAGAGACAGTTAAGAAACAGCAAGACATTCTACAGGGAACCCAACCAGACCCCCCCTCAGCTAATGTGGATCAGATTTCTAAGAATAGGGGTAAAGGAGAGGGAGGTCTTAACATCATGCAGCCTTTTACACTCAAGCAGGTTGCAGAGCTGAAGGCCCATATGCCCATGGAGATGTTGAGGATGATCAAAAGGACCTTTAGAGATGCTCTTGGGGACAAAGGAGGAAAATCAACGAAGTTACTGTTGCAATTTCTCAATTGTAAAGAGCAACACTCCATCCATACAGCTTGCCTGCTGGCAATTTATGAAGGTGACAAGGACAACTACGAATGCATGCAAAAGGTTTTTGGTCCTGTTATAGAGGAAATAATGAAAGTACTATCAAACATTACTGAACTGGACCTAAAGCTTAAAGATCTTGAGAAGGGGAAGCCTCACACGCCATGGCTGTTGCAGCACGGTGCCACTGGTAGTGACACACATACAAAAAAGTTCCCAGTGCGCAGTTTTGAGCCAATCTTGTCCGATAACAACAGGTTTGTGAAAGGTGGTCCCGTAAAGTCAAAAGCCAACCAATTCCACAATTGTGAAAGCCTTCCAATCTACCAAGCAACTGGACCAGTTATTGACTCAGTGTCATGTATGCCCCTCCATTCGTCTCTGGGGCTTGGAAAGCAGGCACTTGAGCTGGTTGAGAGTGAAGCCATTTCACTGGATAATTCCATTAAAGAGGCAAATGGAGAGGCATCCCCAGAACTGGTTGAGGCATTCCAGAAACGAGAGGAACTGACTGTTGAGTGTGCCAATTTAGAAGAATTGTTGGAGGGTGACAATGAAGCCATTAATTCCACTGAAGAAAAGCTTCGGAGTTTTATTGCTGAGACGGCTTCCTATCATCAAAAGGAGGGGCGAAGGTTCACTACTCACACAGTGGAAGCTGTGAAAGCAAGAGAAAGGGCACGAGAGCTTAAAAAGGACAGAGATGGacaacaacaacatgcaaaacaacaccaaGACCAGTTGAAAGCAGCCAAGGAACAATTGACTACCATCACTGCTAAAATAAATAATTTGAAAGGACCTTTCCAAAGGAAATTGGATGGAGTACTAGAAATGATGAATTTGAAGAAGCAAGTGTATCATAAAGGGGCTCTGGTTGGTAACGATGTTGCTAAAATTCTACATCCTGGAAACATTGGGAAAATTGTAAATTGTTTCAAACCACTGAAAGTGAAACTTCAAAATGGAGAACACAAGGTTTTCAGTGATCAAAGAAACATGAACAAGGTGTCAACATTATTGACAAAACTTTCCCAATGTTTCCAACTGTACTCACCCAGCACTCCTCTCTGTCGACACGAGGTAGCATTCCTTGCAGTGCGATGTGCCAGCTTTGGTCACTGGTTTCCCAAAACCTTTCCAAACACCAACTTGCTTCGAAAGTTTCATGTGTTAACTTTCCATGTCCCTGAGAAAGCCATTTCTAAGCACACTGTGGGCATGGAAGCAGAACACTGTTCAGAAAGTATACACCCAGTGGTCAACAGGCTTGAAAGGACTTATGCAACGACACAAAATACATGTGATCGCTTGGCACTGATTGCTAAGAGCCAGTGGCTTCAAAGCAACTCCACTCTAACAAATTTCAGGAAACCTAAGCACAGGAACAGATCAGATGCACTTATAATTACAAAGGAAGAATAG

Transcript

aech_s0042.g63.t1

TTAGCTTACAAAGAAATATGTAGCTTACATGAAGTAAATAAAGCAGAGCAAAACACGTGTAATCCTTGGCTCACGAGTAACACGACATGGTGGCAGTCGGGAGCTTCTAATTGTACAATAAGGCGTTTAAACTGAAAAAGAAATCAGAAAAACGACAATATGGGAGACCCAGCACCGAACGACGGCGAAATCCCCCCGGTTCAGGCAGATCAATTACCTGCAGCGGACGCGGAAAACCACGCACCAGCAATCGTTGCTCAACCAGCGATGGCAGTTCAAGCGGTTTCAATTGCGAACTACCAAGTTCCACCGCCAGAGAAATTTAGCTTCAAACCAGAGGATTGGACACGTTGGATTCGACGCTTCGAAAGATTTCGAAAAGCAACTGGTCTGGATCAAAAAAGCGGCGAAAACCAAGTGAACACCTTAGTTTACTCGATGGGCGAAGAAGTAGACGACATAATGGTCACGTTTGGACTCACTGCAGACGATGCAAGACAGTACGAGCTAGTCAAGAACGGGTTTGAGAGTCATTTCATTGTCAAGAGGAACATTATATTCGAGAGAGCTAAGTTTAACCTCAGAAGTCAACAAGAAGGTGAGTCAGTTGAAACCTTCATTACTGATTTACATTGTCTCGCGGAACACTGTGAATTTGGCGTATTAAAGCACGAACTTATCCGAGATAGGATAGTTGTGGGGTTTAAAGATAAGAAACTGTCTGAAAAACTGCAGTTAGATTCTAAATTGACTCTGGAGAAGGCAGTAACCCAGGCCAGGCAATCAGAGACAGTTAAGAAACAGCAAGACATTCTACAGGGAACCCAACCAGACCCCCCCTCAGCTAATGTGGATCAGATTTCTAAGAATAGGGGTAAAGGAGAGGGAGGTCTTAACATCATGCAGCCTTTTACACTCAAGCAGGTTGCAGAGCTGAAGGCCCATATGCCCATGGAGATGTTGAGGATGATCAAAAGGACCTTTAGAGATGCTCTTGGGGACAAAGGAGGAAAATCAACGAAGTTACTGTTGCAATTTCTCAATTGTAAAGAGCAACACTCCATCCATACAGCTTGCCTGCTGGCAATTTATGAAGGTGACAAGGACAACTACGAATGCATGCAAAAGGTTTTTGGTCCTGTTATAGAGGAAATAATGAAAGTACTATCAAACATTACTGAACTGGACCTAAAGCTTAAAGATCTTGAGAAGGGGAAGCCTCACACGCCATGGCTGTTGCAGCACGGTGCCACTGGTAGTGACACACATACAAAAAAGTTCCCAGTGCGCAGTTTTGAGCCAATCTTGTCCGATAACAACAGGTTTGTGAAAGGTGGTCCCGTAAAGTCAAAAGCCAACCAATTCCACAATTGTGAAAGCCTTCCAATCTACCAAGCAACTGGACCAGTTATTGACTCAGTGTCATGTATGCCCCTCCATTCGTCTCTGGGGCTTGGAAAGCAGGCACTTGAGCTGGTTGAGAGTGAAGCCATTTCACTGGATAATTCCATTAAAGAGGCAAATGGAGAGGCATCCCCAGAACTGGTTGAGGCATTCCAGAAACGAGAGGAACTGACTGTTGAGTGTGCCAATTTAGAAGAATTGTTGGAGGGTGACAATGAAGCCATTAATTCCACTGAAGAAAAGCTTCGGAGTTTTATTGCTGAGACGGCTTCCTATCATCAAAAGGAGGGGCGAAGGTTCACTACTCACACAGTGGAAGCTGTGAAAGCAAGAGAAAGGGCACGAGAGCTTAAAAAGGACAGAGATGGacaacaacaacatgcaaaacaacaccaaGACCAGTTGAAAGCAGCCAAGGAACAATTGACTACCATCACTGCTAAAATAAATAATTTGAAAGGACCTTTCCAAAGGAAATTGGATGGAGTACTAGAAATGATGAATTTGAAGAAGCAAGTGTATCATAAAGGGGCTCTGGTTGGTAACGATGTTGCTAAAATTCTACATCCTGGAAACATTGGGAAAATTGTAAATTGTTTCAAACCACTGAAAGTGAAACTTCAAAATGGAGAACACAAGGTTTTCAGTGATCAAAGAAACATGAACAAGGTGTCAACATTATTGACAAAACTTTCCCAATGTTTCCAACTGTACTCACCCAGCACTCCTCTCTGTCGACACGAGGTAGCATTCCTTGCAGTGCGATGTGCCAGCTTTGGTCACTGGTTTCCCAAAACCTTTCCAAACACCAACTTGCTTCGAAAGTTTCATGTGTTAACTTTCCATGTCCCTGAGAAAGCCATTTCTAAGCACACTGTGGGCATGGAAGCAGAACACTGTTCAGAAAGTATACACCCAGTGGTCAACAGGCTTGAAAGGACTTATGCAACGACACAAAATACATGTGATCGCTTGGCACTGATTGCTAAGAGCCAGTGGCTTCAAAGCAACTCCACTCTAACAAATTTCAGGAAACCTAAGCACAGGAACAGATCAGATGCACTTATAATTACAAAGGAAGAATAGTGTATAAATATGATTTAATTGGAAGCAATATCATACATTTTTGTCGGGGAATAAAATTGCACCTTTTAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06918	DUF1280	Protein of unknown function (DUF1280)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009689	Family	Protein of unknown function DUF1280	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33198	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09230	SCAN; SCAN domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala