Detailed information of aech_s0049.g27.t3 in Acropora echinata

Genomic Location: sc0000049_pilon:1061797...1098701
NR annotation: XP_029211241.2, basement membrane-specific heparan sulfate proteoglycan core protein-like isoform X3 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q05793Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1
P98160Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4
P24043Laminin subunit alpha-2 OS=Homo sapiens OX=9606 GN=LAMA2 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000034DomainLaminin IVInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

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