Gene detail

Detailed information of aech_s0052.g132.t1 in Acropora echinata

Genomic Location: sc0000052_pilon:1450075...1454933
NR annotation: XP_029213436.2, meiotic recombination protein DMC1/LIM15 homolog [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q14565	Meiotic recombination protein DMC1/LIM15 homolog OS=Homo sapiens OX=9606 GN=DMC1 PE=1 SV=2
Q61880	Meiotic recombination protein DMC1/LIM15 homolog OS=Mus musculus OX=10090 GN=Dmc1 PE=1 SV=1
P37384	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14520	HHH_5	Helix-hairpin-helix domain	Domain	Interproscan
PF08423	Rad51	Rad51	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR010995	Homologous_superfamily	DNA repair Rad51/transcription factor NusA, alpha-helical	Interproscan
IPR013632	Domain	DNA recombination and repair protein Rad51-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000150	Molecular Function	DNA strand exchange activity	Interproscan
GO:0000730	Biological Process	DNA recombinase assembly	Interproscan
GO:0000794	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0006312	Biological Process	mitotic recombination	Interproscan
GO:0007131	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0008094	Molecular Function	ATP-dependent activity, acting on DNA	Interproscan
GO:0042148	Biological Process	DNA strand invasion	Interproscan
GO:0070192	Biological Process	chromosome organization involved in meiotic cell cycle	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10872	DMC1; meiotic recombination protein DMC1	-	Chromosome and associated proteins	ko03036	deepkoala