Detailed information of aech_s0054.g100.t1 in Acropora echinata

Genomic Location: sc0000054_pilon:1525138...1558155
NR annotation: XP_015773621.1, PREDICTED: serine--tRNA ligase, cytoplasmic-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P26638Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3
P26636Serine--tRNA ligase, cytoplasmic OS=Cricetulus griseus OX=10029 GN=SARS1 PE=2 SV=2
P49591Serine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=SARS1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR033729DomainSerine-tRNA ligase catalytic core domainInterproscan
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11778SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

TOP