Gene detail

Detailed information of aech_s0063.g112.t1 in Acropora echinata

Genomic Location: sc0000063_pilon:1297574...1307246
NR annotation: XP_044174161.1, mRNA export factor-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q5FVA9	mRNA export factor OS=Xenopus tropicalis OX=8364 GN=rae1 PE=2 SV=1
Q7ZWF0	mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2
A5GFN6	mRNA export factor OS=Sus scrofa OX=9823 GN=RAE1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10971	MRNA EXPORT FACTOR AND BUB3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000972	Biological Process	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006405	Biological Process	RNA export from nucleus	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14298	RAE1, GLE2; mRNA export factor	-	Chromosome and associated proteins	ko03036	deepkoala