Detailed information of aech_s0067.g15.t1 in Acropora echinata

Genomic Location: sc0000067_pilon:149961...163855
NR annotation: XP_029200152.2, signal recognition particle subunit SRP72-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P33731Signal recognition particle subunit SRP72 OS=Canis lupus familiaris OX=9615 GN=SRP72 PE=1 SV=3
O76094Signal recognition particle subunit SRP72 OS=Homo sapiens OX=9606 GN=SRP72 PE=1 SV=3
P49965Signal recognition particle subunit SRP72 OS=Schistosoma mansoni OX=6183 GN=SRP72 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08492SRP72SRP72 RNA-binding domainDomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF17004SRP_TPR_likePutative TPR-like repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013699DomainSignal recognition particle, SRP72 subunit, RNA-bindingInterproscan
IPR026270FamilySignal recognition particle, SRP72 subunitInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR031545RepeatSignal recognition particle subunit SRP72, TPR-like repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14094SIGNAL RECOGNITION PARTICLE 72Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan
GO:0005786Cellular Componentsignal recognition particle, endoplasmic reticulum targetingInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03108SRP72; signal recognition particle subunit SRP72-Secretion systemko02044deepkoala

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