Detailed information of aech_s0078.g28.t1 in Acropora echinata

Genomic Location: sc0000078_pilon:349556...363102
NR annotation: XP_029186305.2, threonine--tRNA ligase 1, cytoplasmic-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5XHY5Threonine--tRNA ligase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars1 PE=1 SV=1
Q9D0R2Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2
Q3ZBV8Threonine--tRNA ligase 1, cytoplasmic OS=Bos taurus OX=9913 GN=TARS1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF02824TGSTGS domainDomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033728DomainThreonine-tRNA ligase catalytic core domainInterproscan
IPR004095DomainTGSInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR047246DomainThreonine-tRNA ligase, class IIa, anticodon-binding domainInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR012676Homologous_superfamilyTGS-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11451THREONINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01868TARS, thrS; threonyl-tRNA synthetaseEC:6.1.1.3
Transfer RNA biogenesisko03016deepkoala

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