Detailed information of aech_s0078.g43.t1 in Acropora echinata

Genomic Location: sc0000078_pilon:568897...637701
NR annotation: XP_029186459.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114954128 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
G5EDK5Cadherin EGF LAG seven-pass G-type receptor fmi-1 OS=Caenorhabditis elegans OX=6239 GN=fmi-1 PE=1 SV=1
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR000998DomainMAM domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR017448DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

TOP