Detailed information of aech_s0083.g79.t1 in Acropora echinata

Genomic Location: sc0000083_pilon:727864...739231
NR annotation: XP_029195674.2, E3 ubiquitin-protein ligase SHPRH-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q149N8E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens OX=9606 GN=SHPRH PE=1 SV=2
Q7TPQ3E3 ubiquitin-protein ligase SHPRH OS=Mus musculus OX=10090 GN=Shprh PE=1 SV=1
Q9UTL9Uncharacterized ATP-dependent helicase C144.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC144.05 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21324SHPRH_helical-2ndE3 ubiquitin-protein ligase SHPRH, second helical domainDomainInterproscan
PF21325SHPRH_helical-1stE3 ubiquitin-protein ligase SHPRH, first helical domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048695DomainE3 ubiquitin-protein ligase SHPRH, second helical domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR048686DomainE3 ubiquitin-protein ligase SHPRH, first helical domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR052583FamilyATP-dependent Helicase/E3 Ubiquitin LigaseInterproscan
IPR000330DomainSNF2, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45865E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

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