Gene detail

Detailed information of aech_s0083.g92.t1 in Acropora echinata

Genomic Location: sc0000083_pilon:881093...884786
NR annotation: XP_029198957.2, LOW QUALITY PROTEIN: 50S ribosomal protein L1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A8F4F7	Large ribosomal subunit protein uL1 OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) OX=416591 GN=rplA PE=3 SV=1
Q255E9	Large ribosomal subunit protein uL1 OS=Chlamydia felis (strain Fe/C-56) OX=264202 GN=rplA PE=3 SV=1
B1L938	Large ribosomal subunit protein uL1 OS=Thermotoga sp. (strain RQ2) OX=126740 GN=rplA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00687	Ribosomal_L1	Ribosomal protein L1p/L10e family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028364	Family	Ribosomal protein uL1/ribosomal biogenesis protein	Interproscan
IPR023674	Homologous_superfamily	Ribosomal protein uL1-like	Interproscan
IPR016095	Homologous_superfamily	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02863	RP-L1, MRPL1, rplA; large subunit ribosomal protein L1	-	Ribosome	ko03011	deepkoala