Detailed information of aech_s0096.g55.t2 in Acropora echinata

Genomic Location: sc0000096_pilon:847578...946406
NR annotation: XP_029207228.2, glutamate receptor ionotropic, NMDA 1-like [Acropora millepora]
Species Acropora echinata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CZR2N-acetylated-alpha-linked acidic dipeptidase 2 OS=Mus musculus OX=10090 GN=Naalad2 PE=1 SV=2
Q9Y3Q0N-acetylated-alpha-linked acidic dipeptidase 2 OS=Homo sapiens OX=9606 GN=NAALAD2 PE=1 SV=1
P70627Glutamate carboxypeptidase 2 OS=Rattus norvegicus OX=10116 GN=Folh1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008978 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →
F5_F8_type_CF5/8 type C domainDomainInterproscan
PF07645
all species →
EGF_CACalcium-binding EGF domainDomainInterproscan
PF10613
all species →
Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF04253
all species →
TFR_dimerTransferrin receptor-like dimerisation domainDomainInterproscan
PF01094
all species →
ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF00060
all species →
Lig_chanLigand-gated ion channelFamilyInterproscan
PF04389
all species →
Peptidase_M28Peptidase family M28FamilyInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF00497
all species →
SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000421
all species →
DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036757
all species →
Homologous_superfamilyTransferrin receptor-like, dimerisation domain superfamilyInterproscan
IPR049883
all species →
DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR019594
all species →
DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR046450
all species →
Homologous_superfamilyPA domain superfamilyInterproscan
IPR007365
all species →
DomainTransferrin receptor-like, dimerisation domainInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR050906
all species →
FamilyNotch signaling pathwayInterproscan
IPR001828
all species →
DomainReceptor, ligand binding regionInterproscan
IPR001320
all species →
DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR007484
all species →
DomainPeptidase M28Interproscan
IPR028082
all species →
Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR001638
all species →
DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044
all species →
NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0015276
all species →
Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005112
all species →
Molecular FunctionNotch bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19020STAB1; stabilin-1-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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