Detailed information of aech_s0096.g56.t3 in Acropora echinata

Genomic Location: sc0000096_pilon:950467...961370
NR annotation: XP_015776341.1, PREDICTED: acid-sensing ion channel 2-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q1XA76Acid-sensing ion channel 1 OS=Gallus gallus OX=9031 GN=ASIC1 PE=1 SV=1
Q6X1Y6Acid-sensing ion channel 3 OS=Mus musculus OX=10090 GN=Asic3 PE=1 SV=2
Q9UHC3Acid-sensing ion channel 3 OS=Homo sapiens OX=9606 GN=ASIC3 PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16622zf-C2H2_11zinc-finger C2H2-typeDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR041697DomainZinc-finger C2H2-type 11Interproscan
IPR020903Conserved_siteEpithelial sodium channel, conserved siteInterproscan
IPR001873FamilyEpithelial sodium channelInterproscan
IPR050527FamilySnail/Krueppel C2H2-type Zinc-fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24388ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09228KRAB; KRAB domain-containing zinc finger protein-Transcription factorsko03000deepkoala

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