Detailed information of aech_s0099.g22.t1 in Acropora echinata

Genomic Location: sc0000099_pilon:704505...716758
NR annotation: XP_029210839.2, eukaryotic translation initiation factor 3 subunit M-like [Acropora millepora]
Species abbreviation AECHI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7SPX9Eukaryotic translation initiation factor 3 subunit M OS=Nematostella vectensis OX=45351 GN=v1g192238 PE=3 SV=1
Q6DK91Eukaryotic translation initiation factor 3 subunit M OS=Xenopus tropicalis OX=8364 GN=eif3m PE=2 SV=1
Q7ZYU8Eukaryotic translation initiation factor 3 subunit M OS=Xenopus laevis OX=8355 GN=eif3m PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005466 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01399
all species →		PCIPCI domainDomainInterproscan
PF18005
all species →		eIF3m_C_helixeIF3 subunit M, C-terminal helixDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000717
all species →		DomainProteasome component (PCI) domainInterproscan
IPR040750
all species →		DomaineIF3 subunit M, C-terminal helix domainInterproscan
IPR045237
all species →		FamilyEukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7Interproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15350
all species →		COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002183
all species →		Biological Processcytoplasmic translational initiationInterproscan
GO:0005852
all species →		Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for aech_s0099.g22.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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