Detailed information of aech_s0107.g67.t1 in Acropora echinata

Genomic Location: sc0000107_pilon:1010775...1017183
NR annotation: XP_015756929.1, PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5FW05Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1
Q05AW7Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1
Q803X1Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=7955 GN=ctu1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01171ATP_bind_3PP-loop familyFamilyInterproscan
PF16503zn-ribbon_14Zinc-ribbonFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035107FamilytRNA thiolation protein, TtcA/Ctu1 typeInterproscan
IPR011063DomaintRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminalInterproscan
IPR000541FamilyCytoplasmic tRNA 2-thiolation protein 1Interproscan
IPR032442DomainCytoplasmic tRNA 2-thiolation protein 1, C-terminalInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11807ATPASES OF THE PP SUPERFAMILY-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0034227Biological ProcesstRNA thio-modificationInterproscan
GO:0002143Biological ProcesstRNA wobble position uridine thiolationInterproscan
GO:0002144Cellular Componentcytosolic tRNA wobble base thiouridylase complexInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14168CTU1, NCS6; cytoplasmic tRNA 2-thiolation protein 1EC:2.7.7.-
Transfer RNA biogenesisko03016deepkoala

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