Detailed information of aech_s0114.g7.t1 in Acropora echinata

Genomic Location: sc0000114_pilon:108204...133275
NR annotation: XP_029179420.2, coatomer subunit gamma-2-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P53620Coatomer subunit gamma-1 OS=Bos taurus OX=9913 GN=COPG1 PE=1 SV=1
Q9QZE5Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1
Q9Y678Coatomer subunit gamma-1 OS=Homo sapiens OX=9606 GN=COPG1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16381Coatomer_g_CplaCoatomer subunit gamma-1 C-terminal appendage platformDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF08752COP-gamma_platfCoatomer gamma subunit appendage platform subdomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012295Homologous_superfamilyTBP domain superfamilyInterproscan
IPR017106FamilyCoatomer gamma subunitInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR032154DomainCoatomer subunit gamma, C-terminalInterproscan
IPR045860Homologous_superfamilySnake toxin-like superfamilyInterproscan
IPR013041Homologous_superfamilyClathrin adaptor, appendage, Ig-like subdomain superfamilyInterproscan
IPR009028Homologous_superfamilyCoatomer/calthrin adaptor appendage, C-terminal subdomainInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR013040DomainCoatomer, gamma subunit, appendage, Ig-like subdomainInterproscan
IPR037067Homologous_superfamilyCoatomer, gamma subunit, appendage domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10261COATOMER SUBUNIT GAMMAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005793Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0009306Biological Processprotein secretionInterproscan
GO:0030126Cellular ComponentCOPI vesicle coatInterproscan
GO:0072384Biological Processorganelle transport along microtubuleInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan

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