Detailed information of aech_s0115.g12.t1 in Acropora echinata

Genomic Location: sc0000115_pilon:154120...162435
NR annotation: XP_029199103.2, iroquois-class homeodomain protein irx-4-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q90XW6Iroquois-class homeodomain protein irx-4-A OS=Xenopus laevis OX=8355 GN=irx4-a PE=2 SV=1
Q688D0Iroquois-class homeodomain protein irx-4 OS=Xenopus tropicalis OX=8364 GN=irx4 PE=2 SV=1
Q503Z8Iroquois homeobox protein 6a OS=Danio rerio OX=7955 GN=irx6a PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR008422DomainHomeobox KN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11211IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030182Biological Processneuron differentiationInterproscan
GO:0048468Biological Processcell developmentInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24889IRX; iroquois-class homeodomain protein IRX-Transcription factorsko03000deepkoala

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