Detailed information of aech_s0119.g11.t1 in Acropora echinata

Genomic Location: sc0000119_pilon:208321...235885
NR annotation: XP_044179118.1, LOW QUALITY PROTEIN: semaphorin-5A-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P283Semaphorin-5B OS=Homo sapiens OX=9606 GN=SEMA5B PE=1 SV=4
Q9VTT0Semaphorin 5c OS=Drosophila melanogaster OX=7227 GN=Sema5c PE=1 SV=3
Q9W686Semaphorin-3ab OS=Danio rerio OX=7955 GN=sema3ab PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01403SemaSema domainRepeatInterproscan
PF01437PSIPlexin repeatFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001627DomainSema domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR016201DomainPSI domainInterproscan
IPR027231FamilySemaphorinInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan
IPR002165RepeatPlexin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11036SEMAPHORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001755Biological Processneural crest cell migrationInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030215Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0045499Molecular Functionchemorepellent activityInterproscan
GO:0048843Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan
GO:0071526Biological Processsemaphorin-plexin signaling pathwayInterproscan

TOP