Gene detail

Detailed information of aech_s0121.g31.t1 in Acropora echinata

Genomic Location: sc0000121_pilon:934482...958640
NR annotation: XP_044167746.1, 2-oxoglutarate dehydrogenase, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0121.g31.t1

TATGTGGGGTTTTATGTAATGACAGATATCACACCTGTACTATAACTAAGTTCTGATGATGCTGATAAATTCCAAAAAAGGGAGAACCCGTACTGAGTTCAGACTTGAGGTTTCATGTTACAACGGAGGTCACACTTCAACACCTAACTAAATTGCGATGATGCTGATAAATTCCAAAACTATTTGCTGATTCCCCAAGTAACATTGTGCTAAAGTCTTGGGATGCTTATTTTCGGCAAGTGCAGAATGGCATGCCGCCTGGCCAAGCCTATCAGCCTCCACCAATCCTGGGACAGCAAGCTGGAATGGTTGCAACAAGGCAAACTGTTCCCAGTGCAACAGACCAATCAACGATCAACAGTTTGGTGTCTGATCATTTGGCTGTATATTCACTGATACGCTGTTATCAGATTCGAGGCCACCACATTGCTCAGTTGGACCCTCTTGGTATCCTTCAAGCAGATTTGTCTGATACTAAACCTGAAGATCTGTTTTTAGAATATTGGGGACTAGGAGAGTCAGATCTTGATAAAGTCTTTCAGCTTCCAGACACCACTTTTATCGGTGGTAATAGCCAAGTTCTTACTTTGAGAGAAATTATCGAAAGGTTGGAGACTGCATACTGTGGGCACATTGGTTTGGATTACATGTTTATCCCGGAAAGATCAAAATGTGACTGGATAAGGAAGAGATTTGAAACTCCCGGAATCATAACATTGGACACAGAGGAAAAGAAAACTGTGCTTAAGAGACTCATTCGATCAACAGGGTTTGAAGCCTTTCTGGCCAAGAAATGGAGCTCGGAGAAGCGTTTTGGAATCGAGGGCTGCGAAGTTTTGATCCCAGCAATGAAAATGATTATTGATAAGTCCAGTGAACTTGGTGTTGAAAGCATCATCATGGGAATGCCGCACAGAGGAAGGCTTAATGTCCTGGCTAATGTTTGCCGCAAATCTTTAGAACAGCTTTTTACTCAATTTGACTCTTCATTGGAGGCTTCTGATGAAGGATCAGGGGATGTGAAATACCATCTTGGAATGTCACATGAACGACTAAACAGAGCGACTAACAAACTCATTCGCTTGGCCGTTGTTGCAAATCCCTCACATTTGGAAGCTGTTGATCCAGTAGTTGAAGGCAAAACAAGATCTGAGCAGTTCTACAGGGGCGACACACAAGGCAAAAAGGATGGTTGTCCCGGAGGTTTTTTCAAGAAAGGCCACTCTCCAACTCAACCAATCAGACCAACTGGGGTGACTTTAGACACAATCAAGCACATTGGAAATGTCATGAGCGCTTCTCCTGGAGGAGACTTCAAAATTCACGGAGGTCTTCGCAGAGTTCTGAAAGCAAGGCATGACCTGTTGGAAAAGGGCTACATTGATTGGGCGATGGGCGAGGCATTGGCGTTCGGTTCGCTTCTGATGGAGGGAGTACATGTGAGATTAAGTGGTCAGGATGTGGAGAGAGGAACGTTCAGCCATCGACATCATGTCCTTCATCATCAAGATAAAGACAAAGTGACTTACAGTCCGCTGAATGACTTGAGTCCAGATCAAGCAATCTACACCGTCTGCAACAGCTCTTTGTCTGAATTTGCAGTGTTAGGTTTTGAGTTGGGTTTTAGCATGACTAATCCTTTTGCGCTCGTTTGCTGGGAAGCTCAGTTTGGGGACTTCAACAACAACGCTCAGTGTATTATTGACCAGTTTATTAGTAGTGGACAAGACAAATGGGTCAGACAGAGCGGATTGGTAATGATGTTACCTCATGGATACGAAGGCATGGTTGTTAATTGCAGTACACCGGCCAACATTTTCCACCTTTTCCGTCGTCAAATTGCGCTGAACTTTCGTAAACCCCTAATTCTCCTCACGCCGAAAAGTCTTCTTCGCCTGGAAGCGGCCAGGTCGCATGTCGATGAAATGACAGAAGGAACTTCCTTCCAACGAGTGATTCCCGACTCGGGCCCAGCCTCCAAAAATCCCGAGAAAGTTCGGAAGCTGCTTTTCTGTACTGGCAAAGTTTACTATGAACTTGTAAAGGAGCGTAACAAAAGAGGTTTAGAGGAAGACATTGCCGTTACACGAGTAGAGCAGATCCTTGCTATGCCCCTATAGAAGATCGAAACTGTGCATAAAATGCTTTGGAATATTTTGAATAATCTTTTTCTGTTCTTTTACAAAGTTTTTTTTTTTTCAATGGAATCGTGTTACAGATTTGCCATGTAACTTTCAACTTTTCAAATAAAGAACAACAAACAAC

Protein

Uniprot

Uniprot term	Description
D3ZQD3	2-oxoglutarate dehydrogenase-like, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdhl PE=1 SV=2
Q6P6Z8	2-oxoglutarate dehydrogenase complex component E1 OS=Xenopus laevis OX=8355 GN=ogdh PE=2 SV=1
Q148N0	2-oxoglutarate dehydrogenase complex component E1 OS=Bos taurus OX=9913 GN=OGDH PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02779	Transket_pyr	Transketolase, pyrimidine binding domain	Domain	Interproscan
PF16870	OxoGdeHyase_C	2-oxoglutarate dehydrogenase C-terminal	Family	Interproscan
PF00676	E1_dh	Dehydrogenase E1 component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042179	Homologous_superfamily	Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily	Interproscan
IPR005475	Domain	Transketolase-like, pyrimidine-binding domain	Interproscan
IPR011603	Family	2-oxoglutarate dehydrogenase E1 component	Interproscan
IPR031717	Domain	Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal	Interproscan
IPR001017	Domain	Dehydrogenase, E1 component	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23152	2-OXOGLUTARATE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004591	Molecular Function	oxoglutarate dehydrogenase (succinyl-transferring) activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0016624	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	Interproscan
GO:0030976	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0045252	Cellular Component	oxoglutarate dehydrogenase complex	Interproscan