Gene detail

Detailed information of aech_s0128.g69.t1 in Acropora echinata

Genomic Location: sc0000128_pilon:744561...750379
NR annotation: XP_029207162.2, peroxisomal acyl-coenzyme A oxidase 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0128.g69.t1

CTTTGACATTTTAATTTCTTGTTTCAATTATTTTAAGTGGGAAAATCTTCTAATTTTGCTACTGTGCCTGCTCGACTTATTGTGGATAGTAAAGATCATGGAATACAGATGTTCTTAGTTCAGCTGCGAGATTTACAAACTCATCAACCAATGCCAGGTATTACAGTGGGTGATATTGGACCCAAATTTGGTGCAAATGCAGTTGATAATGGCTTTGTATTGTTTGATCATGTGCGTATTCCACTCAATCAGATGCTCATGGGCCTTTCAAAGCTTTCACCAGATGGCACCTTCTCAAAGCCTGTAAATTCAAAACTTATGTATGGGACAATGAGTAAAGTGCGAGCAGGGATTGTTTGGCAATCATTCTGGCTGTTGTCCAAAGCCATCACCATTGCTGTTCGGTACAGTGCTGTTCGTCGACAGAATCATCTTAAACCTGGTGAGCAAGAGACACAGATAATTAATTACAAAATGCAGCAATTCAAATTGCTTCCAGGGCTTGCTACAGCCTATGCTATAAGGTTTGCTCTTTATCATGTGATGAGTTTATATCAAGAAGCACAAAAGAGAATTTCTGCAGGAGACTTGTCAATATTACCAGAGTTTCACACAATCACCAGTGGTCTAAAAGCATTCTCCACTGCAACATCCATGCGTCACATTGAAACTTGTCGCCTTGCTTGTGGAGGACATGGATATTTATTGTGCAGTGCTCTCCCTGATTCGTACAAGATAATCAATGCTGCTTGCACCTATGAAGGTGACAATGATGTGCTGTATCTTCAGGTGGCTAGGTATCTCATGAAGGTTGCTTCAAAAGTACAAAAAGGTGAAACACTGTCTCCTTCACTTTCATTCTTCTCACAAACACCAAAGCAGTGTGCAGTAACAAATGCCAACCAGTTTCTGGATCCCCAGGTCCAAGCAAAAATCTATGAGGATAGGACTGCAAGTGAGGTGAGGACTGTAGCAGAAAAACTAGAAAAAAAAGTAATTTCAGGAATGGATCTTTCAGATGCTCAGAATGAACTTTCCGTGGACTTAGTTCATTGTGCAAAGCATTACAGTCATTGTGTACTGGTTCTATTTTTGCTCAAGTCAATGAAGAAACTTTCTGGAATCATCAGTCCACAATTGCAGCAGGTGCTCAAATCTCTGTCTGATCTCTTTGTCCTGTTTGGTATTGCTGAAAATTCAGGAAGTTTTATGGAGGCTGGAATTTTAGATGGTCATCACGTTCAAGCCATACGTCAGCAAATATTTACCTTGTTGGAGATACTACGACCTGAAGCAGTTGCTCTAGTAGATGCCTTTGATTACTCAGACTATGTACTCAATTCTGCTCTTGGACGCTTTGATGGCAATGTATACGAAGACTTATTTAAAAGGGCCCAGGCTTCTACAATGAACCAACAACAGGTTCCATCAGCATATTACAAGTACCTCCATCCCTTGATGAACAGCCAGATATCCAAACTGTAGTGCCATTATTCCTGTTTGGGGATAACCAAAACTATGTTTGACGGTTGAAGGAGCTTAAATGGAGTCGGTCTTGGGCTTCAAAGGTTGAGGATTAGATGCTTGATCAGTGGTTATCATTATTATGCATAGTAAAAATAATAATTTTTAAGATTATTTTTGACCAAAAAGATCGTAAGTTTGTGTATCCAACATTTTACCAAAAATATTTCTCAAGTAATATTGCATGGTCTACATTATGAAACAAAAGAATGTTGCACAGTCTGCTTTAAGATATATATAGTTTCAAGTGTAACAACGTCAATTTATTTGTTCAAGCAACAATAccttactaaaggaaattaatgctgcatgaaattaacgcgttgaattgttaaaatttgctttaatttaagtcatgttatttttgttgagcgttaatttccgcaacgttaattaaatgcggggttaatttccacgctcttaatttccctttttttaaccccgattttggaacctgtccagacattcttgacacttactaaacattaactatggtacaagctttctttatttccatcaaccacaaaagctaaggcaaaggtttacaatatttcaagttcatcttcatccttgtcgctgtcagaagtgatgtcaatatcttctcctttaatttcggccaagatagatttcgaatcatcacaaagtctttctcaactgagtatgagacttgggcaactggctcagttttaaatttctgggcatgcggtgttgaactaaatttgttccagttgtcaccaccaactgtgtcttaatcatgttaatttcctttattgtgaaattctacctcagtcctctttcgtgttaattttactcattcgaaactcgttttccattaaattcgcattaatttaagtcgcgttaatttcCTATGATAAAATAATCATCATTATAAGTTCAATCAAAATTATTTGATCTCGGACAAAACAGTATGAAATTATAAATTCTAATTTCACGAGTACACCCATGTCATTGTTATTTTAATAACTGTACACCATGCACTATTTCATACAATACCAGCTGttataataattattattattacta

Protein

Uniprot

Uniprot term	Description
Q9Z1N0	Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus OX=10141 GN=ACOX1 PE=2 SV=1
Q9R0H0	Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus OX=10090 GN=Acox1 PE=1 SV=5
Q15067	Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens OX=9606 GN=ACOX1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00441	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF01756	ACOX	Acyl-CoA oxidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009075	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan
IPR002655	Domain	Acyl-CoA oxidase, C-terminal	Interproscan
IPR012258	Family	Acyl-CoA oxidase	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10909	ELECTRON TRANSPORT OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0003997	Molecular Function	acyl-CoA oxidase activity	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan
GO:0005504	Molecular Function	fatty acid binding	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0033540	Biological Process	fatty acid beta-oxidation using acyl-CoA oxidase	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0055088	Biological Process	lipid homeostasis	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan