Detailed information of aech_s0138.g24.t1 in Acropora echinata

Genomic Location: sc0000138_pilon:456959...504615
NR annotation: XP_044173300.1, talin-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A3G2LGI8Talin OS=Oscarella pearsei OX=1940113 GN=TLN PE=1 SV=1
Q9Y4G6Talin-2 OS=Homo sapiens OX=9606 GN=TLN2 PE=1 SV=4
P54939Talin-1 OS=Gallus gallus OX=9031 GN=TLN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08913VBSVinculin Binding SiteDomainInterproscan
PF09379FERM_NFERM N-terminal domain DomainInterproscan
PF01608I_LWEQI/LWEQ domainFamilyInterproscan
PF21692Talin_R4Talin, R4 domainDomainInterproscan
PF09141Talin_middleTalin, middle domainDomainInterproscan
PF16511FERM_f0N-terminal or F0 domain of Talin-head FERMDomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR015009DomainVinculin-binding site-containing domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR035964Homologous_superfamilyI/LWEQ domain superfamilyInterproscan
IPR000299DomainFERM domainInterproscan
IPR018979DomainFERM, N-terminalInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR037438DomainTalin-1/2, rod-segmentInterproscan
IPR002558DomainI/LWEQ domainInterproscan
IPR049108DomainTalin, R4 domainInterproscan
IPR015224DomainTalin, centralInterproscan
IPR032425DomainTalin, N-terminal F0 domainInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR036339Homologous_superfamilyPUB-like domain superfamilyInterproscan
IPR019748DomainFERM central domainInterproscan
IPR036476Homologous_superfamilyTalin, central domain superfamilyInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19981TALINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0001726Cellular ComponentruffleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06271TLN; talin-Exosomeko04147deepkoala

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