Genomic Location: sc0000145_pilon:599728...712476
NR annotation: XP_044182329.1, structural maintenance of chromosomes protein 1A-like isoform X1 [Acropora millepora]
| CDS | |||||
| aech_s0145.g15.t1 | |||||
| Transcript |
| aech_s0145.g15.t1 |
| Protein |
| aech_s0145.g15.t1 |
| Uniprot term | Description |
|---|---|
| O93308 | Structural maintenance of chromosomes protein 1A OS=Xenopus laevis OX=8355 GN=smc1a PE=1 SV=1 |
| Q9Z1M9 | Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1 |
| Q9CU62 | Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02463 | SMC_N | RecF/RecN/SMC N terminal domain | Domain | Interproscan |
| PF06470 | SMC_hinge | SMC proteins Flexible Hinge Domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036277 | Homologous_superfamily | SMCs flexible hinge superfamily | Interproscan |
| IPR024704 | Family | Structural maintenance of chromosomes protein | Interproscan |
| IPR003395 | Domain | RecF/RecN/SMC, N-terminal | Interproscan |
| IPR010935 | Domain | SMCs flexible hinge | Interproscan |
| IPR028468 | Domain | Smc1, ATP-binding cassette domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18937 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005694 | Cellular Component | chromosome | Interproscan |
| GO:0051276 | Biological Process | chromosome organization | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0007062 | Biological Process | sister chromatid cohesion | Interproscan |
| GO:0008278 | Cellular Component | cohesin complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06636 | SMC1; structural maintenance of chromosome 1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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