Gene detail

Detailed information of aech_s0146.g2.t1 in Acropora echinata

Genomic Location: sc0000146_pilon:78376...111901
NR annotation: XP_044175447.1, guanylate-binding protein 6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0146.g2.t1

caagcaactgtttgggaagttttcaaaaaacgacctgccgatgaagtctacgtttgtctctaaggcaactcagacagtttaataactacgaacttactatgatgactctgaaagATTGCTGTCGTTGTGAAGGAGATTTCTTATCCAGAGAAGAGCTTTCTTATCCAGAGAAGAAGGTAAAGGCGTCAGTCAGTCATCACAAAAGAGTCATCCCCGAATCAGCAGAGTCAGTTATCGGAAACTTCAGGTCACAGACTTCGATAAGGGGTAAATACATCACAATCTGATGGCAGAGGAACGTTCCCCAGAAGCTACAGGAGGTGGACCTGCTCTTGACGTTGAAGCTGGTATCGGAACATTTCACGTGAGGATTAGAATTAACAGCATCTTGTTAGCCGCAGGAGCCTTTGGTGCTGGCTTCCTGACGTTAAGAGCTTTTTACCGTGCAAACCCGAGGCTAGTTGAGACTGCAGTAGAAACTGCCCTCCAAACTTGGGCGACTTATGTGTTGTCTATACGATCGTCTTCTATCCTTGTAGAATTCATTTGTGATACAGAAGAGAGGTATCAGGCATTTATGAGTGCTTTTGCGACAGGGACAGTGAAGCAAAGACTACAAGAGGAATTTTCTAAAATTGGATTCAAAGGCGAGTTAGAAGTGACGATTGTAGGCGACGACAACGCGCCTCAGATAAGaatggcgtcctcaagtagtgctgtgaatgactcagttattcttactgaagatgacattcccggagcctcgctagctgggcgaaatccttcttcgctgaagaatgaagagttgcggttttggttgtggtgtcgtgaggattcccttaaaggacttaaaacaaaagctttgcttgtaaaacgagtggaggaatacgtgaaaagtggacgcgatcaaatggtgattgatcccgatccggacgaaatttacaccaaaagaaaaaagaggattgtgaatgttatgatgagcagcactccttcgtcatcacccagcgtgaaatacccaaacgatggctggggagattctctggaaagaatgccttcattcacccGTAACATGGCCGCCAGTAGAAGAAATTCTAACATGGCGATCCCTCTTTGCCTTCCCAACAACTACCGTTGGAATGCTACCACCGGTGAATGCTCCAAGACAGGGGAAGAGCGATCTTCGCTTGTTATTGTTGATGAGGCTCTGCAACAACTTGGGACTTTGAAAGGTCCAGTTTGTGTTGTGTCAATCACTGGGCCGTACCGAAGAGGAAAGTCATTCATTTTGAGCGAAGTTTTTGATCAACCAGACGTTTTCCCTGTGGGACATTTTTTAGATGTTGAAACTATGGGAATATGGATGTGGATTGTGCCTGGAGAATTTCGGGATTCCAATGGTCAAGAGTGTTCTATTGTGCTACTGGATTCGGAAGGAATTAATGCTTTTGAAGGAGGGGGCTCTGACGACAATCAGATCTTTACTCTTTGTGTTTTGTTGTCCTCGACATCTTGTGATGAAGCCTTGCAAGCCTGGCTGCTTGAAAATGGAAGTTCAACCCGTCAATCCTGTGATGCTCTTCTAAAGGATTTGAAAAAGGAACACTTGGATCCCGTTCTTGACCGACTATCTGGACAGGGAGCTGTCGAAGTATCGTTTGGTGACATCATGCAGGGATTCGAAAGCATAACGCAAGGCTTTCGTGCTCGTGCCAGAGGAGCTGAAGACGTCTGTGCTGCGATGTTCTATGACTTTCATCCGACACTATTGAAAGAGATGCAGGGACATTTAAAAGATTTCGACGAAAGAATGAGCCAAGAGATTACAGCCCATGCCTATCAAGAGCAGGAAATTATGAAGCTTAAGGAACAACACGCCCAACTCTTACAAGAAAATCGGAAACAGCGAATGGAAATGGAAAAGCAACAAAAAAGGTTTAATGAGGAACAGGGAAGACTCCGAAAGAAAATGACAGCAGATGCGAAAGCTCAACAAGAACAGATGACAAACATGATTAAGGGAAGCATGCAGAAAGCTGAACAAGAGCGAAGAGCCATGATGCAAGAGAATCAAGCATTGAAAGCGCGCTTTGAAAAAATGCAGTCGCAACGGCTTACCAAACTGGCGGGAAACGTGAATCGGAAGTGAAAAGCAACTTCCGTTTGTGGTCAGCACAGAAAACGTCTGTTGTGAATTTTTGTGTGGTGTGGGCAACTTAAGTTTTGTGTCGGTAGTCCAAGTAGGCGCGTAAACAGGGGGTTTTCATTCCCATCTAATCTGTCAGATTATTGGCCAGAATAGTATAACTTGGGTGTTATGGTTAAGTCAAGATTGCTTTTGTAATCATGACTTGTTTCTATGGCCAGCTTTTCCTACTTAACACAGGTCTGCGGACATGTACATGTAGTCTGTTCCATTAGCAACAGGGGTTAGATCAAAACCAAAAATTATTGTGGTCAGCTTTAATTTGCTAAACGGATAAGACTGGTTTATCCAGGTCTTGTTTTTGTAGCTAACAACAATTCATGTTTTTTTTTTAAACGACTGAAACCTTTGCATCGTACATGGTAAAATTTTCAGTCCAAAAGTCATTTATGCCCATCCCTGAGAAGATTTAGGTTTTTTATAGCATCTTTTTAATGCCTGTTATAATAAATTTTTGAGAGAGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02263	GBP	Guanylate-binding protein, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015894	Domain	Guanylate-binding protein, N-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10751	GUANYLATE BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20899	GBP1_3_4_7; guanylate-binding protein 1/3/4/7	-	NOD-like receptor signaling pathway	ko04621	deepkoala