Detailed information of aech_s0150.g29.t1 in Acropora echinata

Genomic Location: sc0000150_pilon:418366...434767
NR annotation: XP_029196703.2, DNA mismatch repair protein Msh2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P43246DNA mismatch repair protein Msh2 OS=Homo sapiens OX=9606 GN=MSH2 PE=1 SV=1
Q5XXB5DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1
P43247DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00488MutS_VMutS domain VDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan
PF05188MutS_IIMutS domain IIDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF01624MutS_IMutS domain IDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR016151Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR032642DomainDNA mismatch repair protein Msh2, ATP-binding cassette domainInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR007695DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR011184FamilyDNA mismatch repair Msh2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0032301Cellular ComponentMutSalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08735MSH2; DNA mismatch repair protein MSH2-DNA repair and recombination proteinsko03400deepkoala

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