Detailed information of aech_s0155.g57.t1 in Acropora echinata

Genomic Location: sc0000155_pilon:576661...588156
NR annotation: XP_029211360.2, la-related protein 7-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZWE3La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1
Q28G87La-related protein 7 OS=Xenopus tropicalis OX=8364 GN=larp7 PE=2 SV=1
Q5XI01La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF05383LaLa domainDomainInterproscan
PF08777RRM_3RNA binding motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR034887DomainLARP7, RNA recognition motif 1Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR014886DomainLa protein, xRRM domainInterproscan
IPR002344FamilyLupus La proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15191LARP7; La-related protein 7-Transcription machineryko03021deepkoala

TOP