Gene detail

Detailed information of aech_s0157.g14.t1 in Acropora echinata

Genomic Location: sc0000157_pilon:496259...513488
NR annotation: XP_029191418.2, trifunctional enzyme subunit alpha, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0157.g14.t1

TTTAAAGTGAAAAGTTTCCACCGCAGAGGCCATTTCGCATGGAGTTATTACTAATCTTGGTTTTTGCTCTCGGTTTGTGGATGAATTGGACGTTTGCTTTCCATAACAAGCACAAATGGATCAACCTCGAAACTTTGAGAAACCTGGTTTCATTTCAGCTGACTTTAAATGCATTGAACATCGCTTTTCACCTGTTGTTGTTAATTCCGTTGCCTTTCTTTGGATATGCAATCAATCCAGGAAACTTCTTATGGACGTTTAAAAGTTCTATCGTTTGCAGATTGTTAACAGTGATGGGGGATTTCATCTCTATTTCCTGCTCGGCAAATGCAACCATCATTTTTATTACAAATCCCGAGGCACAGGAATTGAAACAGGAGAGAAGACGGAAACAAGTTTGTTGTGTATGCATTGTGATGATGTGTTTTTGCTTGGGCAGAATTTTTGTGTTTAGTTTCAGAGAGCTGATTGACACAGATTCTCTTATTATACAAAATTGTCCTTCACATTCTTTCTTTGTTCTTTGTGATCAAAAAGAGGTGAAATATCTGTTTACTTCTTTTTCAGTTCTATCATTTCTCTTGTTTTGCTATTTGGGACGCAGTAGTATTTTGGAACTTTCCGAGTTATGGAATAGTTTTAATTTCTTAATTCGATTTTTAGCCTTTTCACATAAATGCTGCATATTCTATGCTATGACATATGGGTTGCTATACACCCCAGCCTATCTATTTGGGGGACCATCGCTGAGTGTGACATTTAGCTTGGGAAAACACTATTTTGATATCGTTACGCTGGCACTGAGTATTGGTTTGCCAGCATTTTTGGCACATGTATTTGCCAAAGAAGATCTGAATGGCTGTGGAATTTAATAACATTGTTTGGAATCCTCTGCCCGGGAATTTTTAGACTACATGGTTGAAAAGTGTTTTATGAAGTTTCTGTTATCCAGtaactggcctgaattctggctgtttatagtttttgatctgatttaccctgttgaccttctaactaatcctgtccagcAACCTAAGTAGTGGAATGAGTCTATTGTGATGACAGGAAACATCTTGATCAAGTTGTTTCCTGTTATGAGTCAGGTTCAGATGATGGGAAAGAGTTGTTATTCAGGTTATGCTTTTCATGCTCTGATAGCGCATGGGTAAATAGGCGAAAACCCGCATAATTTTGAAGAACGGAAAGAAAGTTAAAGAACTTCTCTGAAGTTTGCACCGAAATCACAATGCTCTCGTCTACTCTCCGGCTTGGAATTAGGCAACTTTCAGTCGCCTCTAGGAGGCACCTTTTGCCAGCAATCAATGCAGGAACTCATCTCCGCTTCAATCAGACAGCATCAGGTGATAGCTGTGTCAAGTGTAACATCACAAGTGATGGTGTGGCTGTTGTCAGATTTGATACGCCAGGATCAAAGGTCAATGTCTTATCAGAGAAGTTTACAACTGATCTGGCTGAGGTTATTCAAGATGTGGAATCTAATGCTGATGTCAAGAGTATTGTTCTTTTGTCCTCTAAACCTGGCTGTTGGATTGCTGGAGCAGACATTAACATGCTGAATGCTGGTGACACTGCCAAGAAGGTTGAAGAAATGTCTGCCAATGGCCAGAAACTCATGCAACATGTTGAGGATAGTAAAAAACCATTTGTGGCTGCTATCATGGGATCTTGCCTTGGTGGTGGCCTTGAGCTTGCCTTGAGTTGTCACTACAGAGTTGCTGTAGATAACTCTTCCACTGTCCTTGGTGCTCCAGAGGTTATGTTGGGTCTGCTACCAGGTGCTGGAGGAACACAAAGGCTCCCTTCACTCGTTGGTCTACCTGATTCTTTGGACATGATGCTCACAGGCAAGAATATCAAAGCAGGCAAAGCAAAAAGGATGGGTCTTGTTGATGGGCTTGTCAAACCACTTGGTCCTGGTCTAAAACCTCCCTTAGAGAACACCTTGCAGTATCTTGAAGAAATTGCTATCCAGACAGCCAAGAATTTGGCAGGTGGATCTGTTAAATCTGACAGGTCACGTTCTTGGGGAAATATGAAAGACTTACAGTACAAAATTACAACTGAAACAAAATTTGGACGCGACTTTGTTTTCAAGAAAGCGAAACAAACAGTTATGAAGCAAACTGGTGGTCTTTATCCTGCTCCATTAAAAATTCTTGATGTTGTCAGAAGTGGCCTAGAAGAAGGACACCAAAAAGGCTTCAAAAAGGAAGCTGAGGAATTTGGTGAACTAAGCCAGACAAGCGAAGCAAAGGCTCTGATGGGTCTGTTCTTTGGTCAGACAGAATGCAAGAAGAACCCTTATGGAGCTCCTCAAAAACCTGTTAACACTGTTGCTGTCATTGGGGCTGGCCTTATGGGTGCAGGCATAGCACAGGTCAGTCTTCAAAAAGGCCAGAATGTGGTCATGAAAGACAACATTTTGGAAGGTCTCACTCGAGGTCAGGAACAAATTTACAAAGGGCTTAATGGCCGTGTGAAAAAGAAGGCCATGACATCGTTTGAAAGGGACAATATGATGTCCAAACTGTCAGGACAGTTAGACTTAAGGGTGAGCAAATAATACTTCCCTATTGAAGAATCTACTACTTACTCAACTAAACGGATCCCTTCTTATTCTAATTTGTCGGGAAAAAATTGAGTGCCATGTA

Protein

Uniprot

Uniprot term	Description
Q29554	Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa OX=9823 GN=HADHA PE=2 SV=1
P40939	Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=HADHA PE=1 SV=2
Q64428	Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02737	3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	Domain	Interproscan
PF00378	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006176	Domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding	Interproscan
IPR001753	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR050136	Family	Fatty acid oxidation complex subunit alpha	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43612	TRIFUNCTIONAL ENZYME SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan
GO:0016507	Cellular Component	mitochondrial fatty acid beta-oxidation multienzyme complex	Interproscan