Gene detail

Detailed information of aech_s0161.g24.t1 in Acropora echinata

Genomic Location: sc0000161_pilon:334439...340825
NR annotation: PFX33353.1, Arylsulfatase B [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

aech_s0161.g24.t1

ATGATGGCATTTGTAGCCATGAACATTGCCATGGGCATTGTAAATACCTCAGATGTAAAAGACTTTTGGTCTACAGACCCAATTCTTTCACATCCTTGGTTCCCTTCAGTGATGAGCAGAGACAGATTCTTGCAAATTCTTTACTTCCTCCATCTAAATAACAATCAAAACAATCCTGGAAATGATAAACTTTTCAAAGTAAGGCCACTACTCGATCACATCGTACGGCAATGCAATAAACACTACAAGCCTAACTGCCAAGTCTCAATTGACGAGCAAATGATTGGCACAAAAAGTAGGATAAGCTTCCGTCAATACATGCCTTTGAAACCTACTGCTAAGTGGGGAATAAAGGTATGGGTATGGCAGATCCTTCAAATCTACACTGGCAAGGAAGGAAATAATGTAGAGAAGGGCTTGGCAAGCAGAGTTGTAAAAGATCTCATGGAAAATTATCAGGGCCTAGGACATCATGTTTATGTAGACAACTTTTACACCTCTCCTCAACTATTCAAAGATCTTTTGGAGGCTGGAACCCTTGCATGTGGGACAATAAGAAGCAACAAGAAGGGTTTTCCTGCAGCAGTCAAAGATAATGTTGATCAGAATGACTCATTATTTTGCAAAGCAGACATGACAGAAGGGTTCATGACAGCAGTACACTGGAAAGACAAAAGGGATGTTTTTGCACCGACTACCATCCATGGCAATGCTGTTGGTGATGACATCCCTCATAAACCAGAGCTGATCTCTGAATACAACAAATACATGGGTGGTGTTGACCACAATGATCAGTTGCTGGTTTACTTTGCCATTGGGCGAAAAACTTTGAAGTGGTGGAAGCGTGTGTTTTGGCGGCTACTCGAGATTGGGCTGGTCAACAGCCACCTGCTCTTTAAACTTAAACCTGACAATGAAAAAGTTACCCAGAAGCAGTTCAGACTCAGTTTATGCCATTCTCTGGTCTTGACCGTGTTATATCAACTGTTTATGAAAATGCCTTCCAAGCGAATGAAGTATACCGCGAAGTTCAAGTTGCAAGTAGTAAACTTTGCTGAAGAAACTAACAACTGTGCAGCAAGCCGAGAGTTCTGTGTGCACGAAAAGTTAGTTCGTGATTGGTGTAAGCAAATTGAAAAGCTTAAGTGCATGCCTAAGAACAAGTGCAGCAACTGGGGAAAAAAGTGTCAGTGGCCAGAACTTGAAGACAAACTTATTGCGTGGATCGAAGAGCAGAGGCAGTCCGGCTACATCGTGACCCGCAACATGATCCGCATCAAGGCGCTTGCGATGACTGATAAACTAAACATCACTGGCTTCCAGGCATCCAACAACTGGTGCACAAGATGTCTGGCACGCAACAATCTTGTCCTTCGCCAGAAAACGAAGATTGCGCAGAGGATGCCCGGTGACTTAGAAGAGAAGATTGTCGACTTCCATCGTTTCGTGCTCAACTGCAGGAAGAAAGACAACTATGAACTTGTCAACATTGGCAATATGGACGAGACACCTGTCTGGTTCGACATGCCATCGGCGAGAACAGTCACCACACGAGGAGAGAAAACGGTCTCAATCACCACCACTGGCCACGAGAAGTCCCGCTTCACAGTCGTCCTTTCCTGCCTCGCTGATTTAACGAAATTGAAGCCGATGGTCATTTTTAAGCGAAAAACACAACCAAAAGATAAGTTTCCACCAGGCGTAGTCGTCGATCATCACCCCAAGGGCTGGATGGATGCAGACGGCATGAAGCTTTGGATTAAAAAAGTTTGGAGAACGCGACCTGGCGACAAGGGAAGAAATCCGTTCACAATAAAACCGAGCTACACCTTCTGGGCATCCTGGATAGGACACCAGTATAGAAGAGGAGACGTGGTGTTCAATACGGAACACAGGAAATGTAGTCGTCCTCAAACTGAAGATGATGAAGACGGCAACAATAACAGCGATACAGCCAAAGCTCTTCTTGAAAACACTTCATCTGAGGAAAGTCTCATCGAAATGATGCATTTCGCACAGGTTGGTTAA

Transcript

aech_s0161.g24.t1

GAAAATTGTGCTGTTCCTTCGCAAGACGAAAGTTTTTCTGAAGGTTCGGTTCAACCTTTGCCGCCAAGTGACAGGTCTTCGCTGCTAGCGGAGGAGAATGTCATTCATAGTTCTGCTTGGAAACTAACAGGTATGCCAATCAGAATAGAGTTGCTGGTTTTCAAGATGTTGGATTAGAGGAAATGATGGCATTTGTAGCCATGAACATTGCCATGGGCATTGTAAATACCTCAGATGTAAAAGACTTTTGGTCTACAGACCCAATTCTTTCACATCCTTGGTTCCCTTCAGTGATGAGCAGAGACAGATTCTTGCAAATTCTTTACTTCCTCCATCTAAATAACAATCAAAACAATCCTGGAAATGATAAACTTTTCAAAGTAAGGCCACTACTCGATCACATCGTACGGCAATGCAATAAACACTACAAGCCTAACTGCCAAGTCTCAATTGACGAGCAAATGATTGGCACAAAAAGTAGGATAAGCTTCCGTCAATACATGCCTTTGAAACCTACTGCTAAGTGGGGAATAAAGGTATGGGTATGGCAGATCCTTCAAATCTACACTGGCAAGGAAGGAAATAATGTAGAGAAGGGCTTGGCAAGCAGAGTTGTAAAAGATCTCATGGAAAATTATCAGGGCCTAGGACATCATGTTTATGTAGACAACTTTTACACCTCTCCTCAACTATTCAAAGATCTTTTGGAGGCTGGAACCCTTGCATGTGGGACAATAAGAAGCAACAAGAAGGGTTTTCCTGCAGCAGTCAAAGATAATGTTGATCAGAATGACTCATTATTTTGCAAAGCAGACATGACAGAAGGGTTCATGACAGCAGTACACTGGAAAGACAAAAGGGATGTTTTTGCACCGACTACCATCCATGGCAATGCTGTTGGTGATGACATCCCTCATAAACCAGAGCTGATCTCTGAATACAACAAATACATGGGTGGTGTTGACCACAATGATCAGTTGCTGGTTTACTTTGCCATTGGGCGAAAAACTTTGAAGTGGTGGAAGCGTGTGTTTTGGCGGCTACTCGAGATTGGGCTGGTCAACAGCCACCTGCTCTTTAAACTTAAACCTGACAATGAAAAAGTTACCCAGAAGCAGTTCAGACTCAGTTTATGCCATTCTCTGGTCTTGACCGTGTTATATCAACTGTTTATGAAAATGCCTTCCAAGCGAATGAAGTATACCGCGAAGTTCAAGTTGCAAGTAGTAAACTTTGCTGAAGAAACTAACAACTGTGCAGCAAGCCGAGAGTTCTGTGTGCACGAAAAGTTAGTTCGTGATTGGTGTAAGCAAATTGAAAAGCTTAAGTGCATGCCTAAGAACAAGTGCAGCAACTGGGGAAAAAAGTGTCAGTGGCCAGAACTTGAAGACAAACTTATTGCGTGGATCGAAGAGCAGAGGCAGTCCGGCTACATCGTGACCCGCAACATGATCCGCATCAAGGCGCTTGCGATGACTGATAAACTAAACATCACTGGCTTCCAGGCATCCAACAACTGGTGCACAAGATGTCTGGCACGCAACAATCTTGTCCTTCGCCAGAAAACGAAGATTGCGCAGAGGATGCCCGGTGACTTAGAAGAGAAGATTGTCGACTTCCATCGTTTCGTGCTCAACTGCAGGAAGAAAGACAACTATGAACTTGTCAACATTGGCAATATGGACGAGACACCTGTCTGGTTCGACATGCCATCGGCGAGAACAGTCACCACACGAGGAGAGAAAACGGTCTCAATCACCACCACTGGCCACGAGAAGTCCCGCTTCACAGTCGTCCTTTCCTGCCTCGCTGATTTAACGAAATTGAAGCCGATGGTCATTTTTAAGCGAAAAACACAACCAAAAGATAAGTTTCCACCAGGCGTAGTCGTCGATCATCACCCCAAGGGCTGGATGGATGCAGACGGCATGAAGCTTTGGATTAAAAAAGTTTGGAGAACGCGACCTGGCGACAAGGGAAGAAATCCGTTCACAATAAAACCGAGCTACACCTTCTGGGCATCCTGGATAGGACACCAGTATAGAAGAGGAGACGTGGTGTTCAATACGGAACACAGGAAATGTAGTCGTCCTCAAACTGAAGATGATGAAGACGGCAACAATAACAGCGATACAGCCAAAGCTCTTCTTGAAAACACTTCATCTGAGGAAAGTCTCATCGAAATGATGCATTTCGCACAGGTTGGTTAACGGGAAGAGGGGGCAATGTACCAAATATCCATTCATGAATCATGTATCATTTCTGCTGTTGCAATGCACCAGCGTATTCTTGGTGTCTTGTTAGTTAGTAAAATTTAGCGGAATGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF09607	BrkDBD	Brinker DNA-binding domain	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010921	Homologous_superfamily	Trp repressor/replication initiator	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR018586	Domain	Brinker DNA-binding domain	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan