Gene detail

Detailed information of aech_s0164.g9.t1 in Acropora echinata

Genomic Location: sc0000164_pilon:274286...331918
NR annotation: XP_044164586.1, heat shock protein 75 kDa, mitochondrial-like [Acropora millepora]
Species abbreviation AECHI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

aech_s0164.g9.t1

ATGGCTTGCTTAAACAGGGTTCTTTGTCGTTTCAAGCACAGTTGTAGCAACATTTCACCACAGAGGTATGGCTGTTTGGTCTCAAGAAGGCTCCATTTTGGAAACTCAGGATTTCAAGGTTTAGGAGAACCAAGAACACATCATTTGGTGAACTGTAGGACTCTATCAAGACATTCAACTGGGAAAGATTTCATAGTAAAGGATAAGGCTTCTGCAGGTGACAATGATGACACTGTTCATGTTATCACACAGAAGGAAGAGACTTTTGGTGCAACAAGCAGACATGAATTCCAGGCAAATACAAAGCAGTTATTGGACATAGTCGCCAAGACACTATATTCAGAGAAAGAGGTGTTCATTCGTGAAATAGTCTCCAACGCGTCTGATGCCCTAGAGAAGCTTAAATACCAAGTTATGATTGGGGAGGCTGTTGCTGACAGTGATCTTCCCTTACAAATTAACATCTGTACTGATCAGGAGAGCAAGACTCTTACGATAATGGATCATGGAGTAGGCATGACTGAGAAGGAGGTGATAGATAATTTGGGCACCATTGCGCGATCAGGTTCAAAAGAATTTCTGCAGAATTTGGAAGAGCAGGGAAAGAGTGATTCTGAAGCTAAGAGCATTATAGGACAGTTTGGAGTGGGGTTCTATTCTGCTTTTATGGTGGCAGATAAAGTTGATGTTTTCACGCGATCCTATGTACCTGACAGTGAAGGGCTAGTGTGGACATCTGATGGGTCTGGAGCATTTGACATGGCAAGGGCAAAGAATGTGTCTAGAGGGACGAAAGTGACGATTCACCTGAAGGATGAATTCAAGAATTTTTCCATTAAAACTGTGGTTGAAGATATCATAAAGACTTACAGTAACTTTGTTAGCTTCCCAATCTTCTTGGACGGCACTCTCATTAACACAGTTCAGGCTTTGTGGGTATCAGACCCCAAGACTGTCTCCATTGAAGATCACAAGGAGTTTTATAAGTTCATTGCCAAGACTTATGATGAACCAAGATATGTACTTCACTTCAAGACAGATGCTCCTTTGAATATCCGCAGCTTGTTTTATATCCCTGAGACTCCTCCCCCTATCTTTGCCATGCAGCATATGGAACCTGGAGTCTCCCTCTACAGTAGGAAAGTCCTGATTCAATCCAAAGCCTCCAAACTTCTTCCTCACTGGCTTTGGTTTGTGAAGGGTGTTGTAGACAGCGAGGATATTCCACTAAATTTAAGTCGTGAGATTCTTCAAGACAGTGCCATCATCAGAAAGCTTAGTGATGTGTTAGCAGCCAGACTTGTCAAGTTTTTGCTAGAGCAACAGAAAAAGGACCGAGTGAAATATGAGATGTTTTACAAAGATTTTGCAACCTTTTTCCGTGAAGGAGTTGTTGTTGCGGAGAATGATGAACAGAGAGAGAACATAGGAAAACTTCTTTTATTCGAGTCATCAAATGAGAAACCAGGAGTGCTAACTTCACTCTCTGTCTATGCATCTCGTATGAAGCCCACTCAAGAAAAGATTCTCTACTTGTGTGCTCCGAGCCGTGAAATCGCCCTGTCCTCTCCTTACTATGAAGTTGTGGAAAAAGAGAAGTTGGAGGTTTTGTTTACCTATAATGAACAAGATGACATTGCTCTTCATTATCTTAAGACTTTTGGCAACAAGGGAGTAATGTCAGTGGAGAATTTCCTATCAAACCAAACAGATTCCAAACCTGTGGTACCAGAAAGTGGCACCTCTCAATTAGAGCAGTCTTCAGATTCTCTTAAAAATGATCAAGCCGAGGATTTAGCCAATTGGATGAATGTCATTCTTGGAAAAGAAAAAGTGTCCAAAGTCATGGTTTCTAGACACTTGCCTCAGACAAGTCATCCAGCGATGGTTACTCTTCCAGATATGGCAGCTGCTAAACAGTGGCTGAAAGTCACAAGAACAGGACAATTTCAAGACATTGCCAGTTCTAAGTACCAAATATTTCAACCTTCTCTCGAAATAAACCCTAGACATGAACTGATCAAGCATTTGGAAGGTGTGCGTTTAGTGAATGCAGAATTAGCCGCACTGGTAACACACCAGTTATTTGACAATGCGATGATGTCTGCTGGACTTCTCCATGATCCAAGGACCATGTTAGGAAGGTTAAATTCCTTACTAGAAGCGGCATTAGATTCTGCTAAAAAGGAAAAGGGCCCCAAATCTAATTGA

Transcript

aech_s0164.g9.t1

AATAGGAAACCCAGTGCACGTTGCCTTCCGCAGATCTATCGATTAGAATGGCTTGCTTAAACAGGGTTCTTTGTCGTTTCAAGCACAGTTGTAGCAACATTTCACCACAGAGGTATGGCTGTTTGGTCTCAAGAAGGCTCCATTTTGGAAACTCAGGATTTCAAGGTTTAGGAGAACCAAGAACACATCATTTGGTGAACTGTAGGACTCTATCAAGACATTCAACTGGGAAAGATTTCATAGTAAAGGATAAGGCTTCTGCAGGTGACAATGATGACACTGTTCATGTTATCACACAGAAGGAAGAGACTTTTGGTGCAACAAGCAGACATGAATTCCAGGCAAATACAAAGCAGTTATTGGACATAGTCGCCAAGACACTATATTCAGAGAAAGAGGTGTTCATTCGTGAAATAGTCTCCAACGCGTCTGATGCCCTAGAGAAGCTTAAATACCAAGTTATGATTGGGGAGGCTGTTGCTGACAGTGATCTTCCCTTACAAATTAACATCTGTACTGATCAGGAGAGCAAGACTCTTACGATAATGGATCATGGAGTAGGCATGACTGAGAAGGAGGTGATAGATAATTTGGGCACCATTGCGCGATCAGGTTCAAAAGAATTTCTGCAGAATTTGGAAGAGCAGGGAAAGAGTGATTCTGAAGCTAAGAGCATTATAGGACAGTTTGGAGTGGGGTTCTATTCTGCTTTTATGGTGGCAGATAAAGTTGATGTTTTCACGCGATCCTATGTACCTGACAGTGAAGGGCTAGTGTGGACATCTGATGGGTCTGGAGCATTTGACATGGCAAGGGCAAAGAATGTGTCTAGAGGGACGAAAGTGACGATTCACCTGAAGGATGAATTCAAGAATTTTTCCATTAAAACTGTGGTTGAAGATATCATAAAGACTTACAGTAACTTTGTTAGCTTCCCAATCTTCTTGGACGGCACTCTCATTAACACAGTTCAGGCTTTGTGGGTATCAGACCCCAAGACTGTCTCCATTGAAGATCACAAGGAGTTTTATAAGTTCATTGCCAAGACTTATGATGAACCAAGATATGTACTTCACTTCAAGACAGATGCTCCTTTGAATATCCGCAGCTTGTTTTATATCCCTGAGACTCCTCCCCCTATCTTTGCCATGCAGCATATGGAACCTGGAGTCTCCCTCTACAGTAGGAAAGTCCTGATTCAATCCAAAGCCTCCAAACTTCTTCCTCACTGGCTTTGGTTTGTGAAGGGTGTTGTAGACAGCGAGGATATTCCACTAAATTTAAGTCGTGAGATTCTTCAAGACAGTGCCATCATCAGAAAGCTTAGTGATGTGTTAGCAGCCAGACTTGTCAAGTTTTTGCTAGAGCAACAGAAAAAGGACCGAGTGAAATATGAGATGTTTTACAAAGATTTTGCAACCTTTTTCCGTGAAGGAGTTGTTGTTGCGGAGAATGATGAACAGAGAGAGAACATAGGAAAACTTCTTTTATTCGAGTCATCAAATGAGAAACCAGGAGTGCTAACTTCACTCTCTGTCTATGCATCTCGTATGAAGCCCACTCAAGAAAAGATTCTCTACTTGTGTGCTCCGAGCCGTGAAATCGCCCTGTCCTCTCCTTACTATGAAGTTGTGGAAAAAGAGAAGTTGGAGGTTTTGTTTACCTATAATGAACAAGATGACATTGCTCTTCATTATCTTAAGACTTTTGGCAACAAGGGAGTAATGTCAGTGGAGAATTTCCTATCAAACCAAACAGATTCCAAACCTGTGGTACCAGAAAGTGGCACCTCTCAATTAGAGCAGTCTTCAGATTCTCTTAAAAATGATCAAGCCGAGGATTTAGCCAATTGGATGAATGTCATTCTTGGAAAAGAAAAAGTGTCCAAAGTCATGGTTTCTAGACACTTGCCTCAGACAAGTCATCCAGCGATGGTTACTCTTCCAGATATGGCAGCTGCTAAACAGTGGCTGAAAGTCACAAGAACAGGACAATTTCAAGACATTGCCAGTTCTAAGTACCAAATATTTCAACCTTCTCTCGAAATAAACCCTAGACATGAACTGATCAAGCATTTGGAAGGTGTGCGTTTAGTGAATGCAGAATTAGCCGCACTGGTAACACACCAGTTATTTGACAATGCGATGATGTCTGCTGGACTTCTCCATGATCCAAGGACCATGTTAGGAAGGTTAAATTCCTTACTAGAAGCGGCATTAGATTCTGCTAAAAAGGAAAAGGGCCCCAAATCTAATTGAATCCCTCGCTGCCGATGAATGTCGATCAAGTTCAGGAGGCGACACAAACAGATCTGATCTTATTGAGAGTACCACGATCCGTGATGACAGTAAATTGGGCGGATGAGCAAATCGCATTGGAAATCATGCCATATTTCCACAAAGAGCACAAAATTACAGTTGAAAATGGTTGTTTGCTTTGGGGAATTCAAGTTATAATTGCTATGCATCTTCGCAAACGTCTGTTGTATGAATTACACACAGGGAATCCAGGAATTGTCCAAATAAAGTCACTCTCGTGAGTTCATGTCTGGTGGCCTAACCTCGACAAAGATGTAGCCGCAATTGTTCAGAAATGTGACGAGTGCCAGAGGTCAAGTAACAAGCTCCAGCCATCACCCTTACACCCCTGGGATTGGCCAAAGACAACAGTGCACAAGTCACTTCGCAAGAGTTTGGCTACTTAACCAAAGGAAACGGCATCAAACATACACTAGTTGCTCCATACTGTAACATACAGAAGCCATGTCATTGTTACATCTCTCTTCTCGTATATGAAACAAACGAAACAAAGCCTGGCTAATGCAAAACTCCAAAAAGTTAGAGTAAATAGTAAATAAAGTAATATTCTAGAATCCATAACATGGAACTCAACAAGTGTCCAATGTCCTCAAGTCGATAATAATAGTAAGAGATTCAACTTGATGGCAGAGAGACAGCGTTCTTAAAACTGCAAAGCACTGTACACATATTTGTGCACATGTGAGTTAGTGACTCTTTGAGGGCAGCGAACTGGGCAACCACTTCTGGTTGTGTGCAGCTTGTCTGGCTGGGAGATTCCAGCACTGGAAATTGTGGGAGATGCTGGTTGTAGACTTGATGGCCAGTCGCCGAGTTCGGTGACTGAGGAAAGCATACTGTTGTTGGGATGGGGTGTACTGTCATCTACTATGAGATCTGAGCAGTGGTCAGTTATATTGGCAGCTTCGGTTGATCGATGCAAGTGTCTCCTGTTGTGCCGACCTGACTGCACGTTATAAGAGCTTGGGCTGACATGTCTTTTGACAATGATGGCATTGTTAAAAATTTTGGATGCAAATTTTATTTGCACTTGATTACCTGGGCTTAGGGGGGGCCTGTAGCCTTTCCACTTCAATGAACTTCGAGTAGTTATAGACCGTCAAGAAGTAGGTTTTGGACTCAAACTCAAAGAGATCTGTCCCCACCATCACAAAAGGTAATTTGGGAGTTTCTGTCGTGGATAGCGGCCCGGAGAGTTGTTTTCTTTGAAAGTCGGCGCACTTTGTACAGTTCTTAACAGGTTCCTCATTGCCCGAGTTCATAGCTGGCCAATATAGCACTTCAAGAGCACGTTGTTTGCATTTAATTATACCCAGGATTGATTCTTGGACTATGTTCAACATTTGTTGCCATAGACTAGGGGACACTACGCTTCGCATTCTTTTTTAAATGATTCCATAGCATACGGCTAGTTCACTTCTAGAGTCCCAATACGAGCACAGTGGCCCAGGTACTTCCTGTTGAACGTTTGGCCAGCCATTCAAGATTATTGTTTGTACTTGGTTTAGCTCACGCTGTGTGTGCTTTACTCTGGAGAGGACACATTGACCAAATGCATTGGAAACGTGAAGACACTCCAAGACAGGCGTTGGCGTGACATGACGCCTTCAAATGATTCAGGCATGTCTTTCACATGCAGCCGAGAGCACTTCCACAAATGAAAGCTGCGGAAACCGCGACAGGCAGTGCAAAGTCTAGTAGCAATGGGAAATGTAGCAGAGATGCGATGGCGTCTGTAACCGCACCAGCACAAGCTTATCCGCAACCATGCTATCCAAGTTGACAGGGCAAAGCCCCACAGCACCTGGGTTTTGATCAGTAATGAATCAAGTAGTACATGCTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XHZ0	Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1
Q12931	Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens OX=9606 GN=TRAP1 PE=1 SV=3
Q9CQN1	Heat shock protein 75 kDa, mitochondrial OS=Mus musculus OX=10090 GN=Trap1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004497 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13589 all species →	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF00183 all species →	HSP90	Hsp90 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR001404 all species →	Family	Heat shock protein Hsp90 family	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR037196 all species →	Homologous_superfamily	HSP90, C-terminal domain	Interproscan
IPR020575 all species →	Domain	Heat shock protein Hsp90, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11528 all species →	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09488	TRAP1, HSP75; TNF receptor-associated protein 1	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.