Detailed information of aech_s0262.g4.t2 in Acropora echinata

Genomic Location: sc0000262_pilon:31876...45451
NR annotation: XP_044175692.1, tripartite motif-containing protein 45-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9H8W5E3 ubiquitin-protein ligase TRIM45 OS=Homo sapiens OX=9606 GN=TRIM45 PE=1 SV=2
Q5BIM1E3 ubiquitin-protein ligase TRIM45 OS=Bos taurus OX=9913 GN=TRIM45 PE=2 SV=1
F7H9X2Tripartite motif-containing protein 2 OS=Callithrix jacchus OX=9483 GN=TRIM2 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01424R3HR3H domainDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047153FamilyTRIM45/56/19Interproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001374DomainR3H domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036867Homologous_superfamilyR3H domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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