Gene detail

Detailed information of aech_s0263.g7.t1 in Acropora echinata

Genomic Location: sc0000263_pilon:195269...205295
NR annotation: XP_029204260.2, ras-related protein ORAB-1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0263.g7.t1

CTAGCATGTCCACTTTTCAAGATAGACGGGAGCTTTTCTGCCGCAAACTGTTTATGGGAAAAGTCGATAATAAGGGGCACAAATTCCATCAGCTTCTCCCGCCGCTTAATGCCATAACCTACAAAACTAGGAAGAGCAGGAAATTTAGTATTCCACATTGTAAGACAAAGGGATTTTCAAGTTCGTTTATAATTCATTATGCCTCTCAGTTGTTGAGATCTTAATATAACCTTTAGTCCACGTATTATAGTATGTTCATACTTTTATTATATTTTAAACGTTATTGAATTATTGTAATAGTTCTTACAAGTAATTCAGTCTTTTGACTGCGATTGGTATTTTAATAAACGCTTtatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctCATTACAATGTCGGCTTCACTTTGTATAGATCTTGATATACGCTTGGTACTGCAAGACCTTTCAAACTTAAAACCTTCCTTCAATATTTTCTGTATTTTTCAATATATCTAGTATTTTTGTAGAGATAAAAGAGCAAAAAGGGCAACTAAGCCTGAAAACAGAAGATGCTCTTTGATAAGAAGTTCCCTGTTGAAGAGAGAGCAGTAATACAGAGTAATATAGAGTAGTTTGTTACTTTTCACTTTCTGACAAAGATTCTAAAATGGTGAAAGAATACAAGGTCGTACTGTGTGGAAAAACAGGCGTTGGGAAGACTACTCTTTTTCGATGTTTGTGTGGCCGATCAGATCAGCAAAGGGCAATGGATCGTGAGTGCAAAATAACAATGACATTAGGCGGTGAAACAGTTGAGCTTCAGCTGTGGGACACCCTTGGTCTGGAAGAATATGCTCAGTACACGCGATCACATTTCTTACTCACCCAAGCAGTGCTGTTTGTTTACAGTGTAACAGACAAAGATTCCTTCAAACAGGTTCTAGACCTATTGCCTTTGGCAAAGACTCATGCTCAAGGTGCTTGTTACATTTTAGTAAGGAACAAGATTGACTTGATTCCAACATTCATTGAGGATGAGATTCCTGGTGCATTTGCATTGCAATTTAGCACTTCGGCATTAAATGGCACAGGCACAAATGAGATGCTTGGGCAAATAGCAACTCATCTACACAAAAATGCTACACCCATGAAATCCATTCATCCACCATCAGTGCAAGGTCAACATTCCGAATATGGTACCAGCTATTCTTGTGGTGGAGATGATATACTATTATCATTGACACAACCCTTACCGAATCTGCAGTCCTTAGCCATGGACAACATCAAAGCAAAGTGCACATGAACGTTACTGGTCGAAAACCAGGAACAATGTTATTTCTTTATTTCACAACATCAGGCACTCAAATACACTTTTTTATGTATTAAAATAATTGTATATATAAAGTTCAAACAAGGCGTGAAACTACTTGTAAAATTGAATTAGTAGATCCTAGCTTTCGCTGATCTGTAGCATCATCTATTCCAGATACCGTAGACCCTTTGTGCGATGACATTGGCTCATTAGATTTTATTGACATCTTGCCTATCTTTTTTTGCTTTTCTCTCATTTAGTTTTATTGCATATATAGCCTTACACAGAATGTTTTCAATATCCCTGAAGTAGTTTCTTGCCTCATTTGAACTTTTTCTAATTTGTAAACATGCTACTGAAGGACAACATCAAAAAGACTAAATTATGGTAATTCTACTTTTTGTTGGAGATCATCCTTTTTACATTATTCATACAAACTATGTATGAAATTTTTCAAAAAAAATTGATGGCAATCAGGATACAAAATAAGCTACTTATTTAAACACTAGACCGCATTTTTTATAGGTCTATCAGCTAGACCCGTGTGGGATgtgagtcattaacaagcttttctggtgttctcccaacatcccaagtaagtttattacaccagtaaatccatagaaaatttggtctattgtttttacaaaacaattgtgagtagcagcaattctctgagtttactggcacaataccggtaacccataggtttttgaccaatcagaatgcacattgtatccaagttgtttttgtaAATAACAATCTACTTAGATGCAATTAATTTCTAACACTCAAACGTAATTTAACAGGCTATCTGTTAGTGGGAGGGTAAGGGAAATCTCCAGCATTACATTTAGATAAAAGCAAAAACTTGTAAATCGACCTAAAAGCAATTTCTTAAGCTAATTAAATCTATGTAAAAGTATGATGTTTGTGTTAAAAAAGGGGGAACAAACCTGTCCAATTATTTCACATATCACAGAGGACCCTCACATAATTTTTCTTTTATTTCACACCATTATTATTAACCTCAGCAAAAAAGATTTCCTCCTCCTTTACTTGCCTAAAAAATCAACAGTGTACATAGTTCGAAGGTAAAAAACAACGGATAGAATTTTTCCTTTAGTTACAGTGTATGGTGATGACTTGGAAAATACTACATGGTAGTAATTTAGAGATTGTTTACTGTTCACCTAATGATTGATTAACACAAGTTTTTAAGCCATACCATTAATTGTTGCATTTTGCAAGACCAGGCATTTCAAAAATTAGGATCGATTGTAAATAATGTATATTCACACTATTTAAAGTAGATAGTGACACAATCCCAAACATCGTGTGTTGTTACTGCTGCCACTACTCCAAGAAAACAAAAGCCTTTGCCTAGTGAAGTAGGGACAACTATGGAAATCACACCAGTTGTTTTCTGCATACACTGCTGTACAAGCATTTTATTAATTTATTTTTTGGAAGGGGGAGGGAGCCCTAACAAAGCCTGTCATCTGCATATATATTTGTTCAGACACTTTTGTCCTTGTTAGCACTCACAGATCAGCTTAACATTACAATGCATAGGTGAAGGATTCCAATAGtaccgtacttacccatgtataagtcgaccttttatagcctaaagattggtccaaaaaatcgccctcgacttatacatgggtcgaagattgagatcaaaaaaaagttcaggacaaatttttcatgtaaccatagctaacctgaaagaaaattcagataaaagataagttttcac

Protein

Uniprot

Uniprot term	Description
P34729	Ras-like protein 1 OS=Physarum polycephalum OX=5791 GN=RAS1 PE=2 SV=1
B4LY29	Ras-like protein 1 OS=Drosophila virilis OX=7244 GN=Ras85D PE=3 SV=1
B4GFJ8	Ras-like protein 1 OS=Drosophila persimilis OX=7234 GN=Ras85D PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050227	Family	Ras-related protein Rab	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47977	RAS-RELATED PROTEIN RAB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07852	RASL11A; Ras-like protein family member 11A	-	GTP-binding proteins	ko04031	deepkoala