Detailed information of aech_s0483.g1.t1 in Acropora echinata

Genomic Location: sc0000483_pilon:37936...84254
NR annotation: XP_044175290.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114961454 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24026FAT ATYPICAL CADHERIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

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