Gene detail

Detailed information of aech_s1175.g1.t1 in Acropora echinata

Genomic Location: sc0001175_pilon:1517...9140
NR annotation: XP_044182266.1, sodium/glucose cotransporter 5-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s1175.g1.t1

ATGGTGATGCCAGGAATGATTGCCCGCGTGCTTTTCCCTGATTCCATTGCCTGTCCTGACCCAGAAAGTTGTTTGAAACATTGTGGCAATGAATGGGGCTGCACTAACAATGCTTATCCCAAGTTGGTTCTGAATGTGCTTCCGGTTGGATTGGTAGGTTTGATGATGGCTGTTATGATGGCTGCTCTTATGTCTTCCCTCTCTTCGGCCTTCAACAGCAGCTCAACCATTTTCACTGTTGATGTGTGGCTGCGCTTCAGACCTCAGACCATCCAATCTTATCTTGCACCGCCAATCACCATGGTGTTTGGATTGGGTATCCTGTGGACTGGACTGACATCAGCTGGTGCCTTGTCAGGTCTCCTCATTGGCTTTGTCCTTGGCATGGCCAAATTCATTGCTGGAAACGTCTACACAACGCCCAAGTGTGGTGAAGAGGATACTCGTCCTGGATTTGCCAAAATGCACTTCATGTTTTATGCAATCATAATCTTCGTGGTCAGTGGTACTGTGATGGTTGTAGTGAGTTTCTTCACAAAGAAAGTTCCGCTGAATGAGCTTGGTGGCCTTACCTGGAAAACGATCAGTGATCCGCCAATCTCCCATGGGGCTATCGGCGAAATCGACTGTGCAGAGAAGGCTGAAAATGGAGGTGTCCACACAGAGGCTCTTGAGCTGTTGGAAAAGAAAGGTGCATTAGGGCCAACCACTCACATAGAAACATCACTGGATGGCAATAACACCACTAATGCAGTTGAACAACAATACAGACCAAATGCAGCAGTGGACGAAGAATCAAATGTGCTTCGTCTGGTGACAAATGACAAAGTCAGACTCACAGTTGTGCAATTTGAAAGAGAGGACCCTGTGCTGAAGTGGTTCTTACGCATCATGAGCGTCTTACTGATTGTTTGCTTGGCTTTCCTGTGGATCTTCTATCGTTAAGGTTGTATCACACAAAAAATTAAATAAAAATTTGTGTCATGTCCACTTTAATAAGATAAATGAAAAAAGCGGGTAGCTGGCAAACATAGCCTTTGACATTATTTTCACAATGTTCCTATTTTCGTTATATGTTTGATTCTCTGGGATACACTGTAAAATATACATAACTTGAAATAATTTTGTCCTTAGCCCAGGTGAAGTAGTCATTCCTTGACCAAGATTTTTTACAAGAGTCTGGCATAAATGAGATTTGTATTGCTAGGTTTAGttttttttttttttttttGGAAGGGAAACAGTAATATTTGTCCTGAGGATGCCAATATGACACCTGCTGGGCCAGTTAGCTACCTGGGAATAAGATATTGTAGCTATTCGTAGTTGTAGAATTAAGTTCTACGCAGTATCACAAAAGTAATTATTTGTTGAAGTAAATAATTATTATTATATTGGATAAGAATAGTGGTATTTGAAGATGGACTTACAGTTTGTGGGAATAAAACCTATATAACCTTTCAAATTATTATAAATCATAATCCCATCTTAATGTTAAATCCAAATTCCACTTAAGCTTGTTATTACTCACTCTCACTGTAAGACATGAAGAAATGGATATAAACTAAAAGTCACAAACAGTTTTCACCCATATGTTGTCTAAACCGTGATGAGAAATTCAGTGTGACACTAGTATGATTGTTGCCCTGTCAAGTCTACCATTTTGTTTCATAACATCTACAATTTCTGTGACATCAAAACTCAAAGGTTAGCATTTTTCAATTGTGAGACTACAGGTGATTATAAACAAAGGCTTCACGTTGTTATGGTAACTCATAAACTCTGCAGTTTGATTGGTTCATTTCAAAGTTCTAATTTGGCTTTGAGGAAGTGTATTCAAATGAAAAAAGCATTAGTGAttaaccctttcctgcccaatcggcacttttgtggattttactctgtctataacgccagacgattttactcgttaaaggagaactccttgggcaggaaagggttaaaaatgcaaatgattatTTGTCAGAAGTGTTTTTCTGTACAAAAAAGcaactttaaaatttaaaaggattcaaatcctaaatttcaaaGTAGCTTGCTTGTACAATAAAAAAATGTCACACTA

Protein

Uniprot

Uniprot term	Description
Q5FY69	Sodium/mannose cotransporter SLC5A10 OS=Sus scrofa OX=9823 GN=SLC5A10 PE=2 SV=1
Q6R4Q5	Sodium/mannose cotransporter SLC5A10 OS=Bos taurus OX=9913 GN=SLC5A10 PE=2 SV=1
P26429	Sodium/glucose cotransporter 1 OS=Sus scrofa OX=9823 GN=SLC5A1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00474	SSF	Sodium:solute symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001734	Family	Sodium/solute symporter	Interproscan
IPR038377	Homologous_superfamily	Sodium/glucose symporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11819	SOLUTE CARRIER FAMILY 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005412	Molecular Function	D-glucose:sodium symporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14389	SLC5A9, SGLT4; solute carrier family 5 (sodium/glucose cotransporter), member 9	-	Transporters	ko02000	deepkoala