Detailed information of aech_s1817.g1.t1 in Acropora echinata

Genomic Location: sc0001817_pilon:1...3533
NR annotation: XP_015753510.1, PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5M954tRNA-splicing endonuclease subunit Sen2 OS=Rattus norvegicus OX=10116 GN=Tsen2 PE=1 SV=1
Q6P7W5tRNA-splicing endonuclease subunit Sen2 OS=Mus musculus OX=10090 GN=Tsen2 PE=1 SV=1
Q8NCE0tRNA-splicing endonuclease subunit Sen2 OS=Homo sapiens OX=9606 GN=TSEN2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02778tRNA_int_endo_NtRNA intron endonuclease, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011856Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR006678DomaintRNA intron endonuclease, N-terminalInterproscan
IPR036167Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan
IPR006677DomaintRNA intron endonuclease, catalytic domain-likeInterproscan
IPR006676FamilytRNA-splicing endonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21227TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000213Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0000214Cellular ComponenttRNA-intron endonuclease complexInterproscan
GO:0000379Biological ProcesstRNA-type intron splice site recognition and cleavageInterproscan

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