Detailed information of aech_s2169.g1.t1 in Acropora echinata

Genomic Location: sc0002169_pilon:1...1160
NR annotation: XP_044179497.1, 116 kDa U5 small nuclear ribonucleoprotein component-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08810116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1
A4FUD3116 kDa U5 small nuclear ribonucleoprotein component OS=Bos taurus OX=9913 GN=EFTUD2 PE=2 SV=1
Q15029116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens OX=9606 GN=EFTUD2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42908TRANSLATION ELONGATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030623Molecular FunctionU5 snRNA bindingInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan

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