Gene detail

Detailed information of aflo_s0002.g121.t4 in Acropora florida

Genomic Location: sc0000002_pilon:1751128...1761866
NR annotation: XP_029207367.2, DNA-directed RNA polymerase I subunit RPA2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O54888	DNA-directed RNA polymerase I subunit RPA2 OS=Rattus norvegicus OX=10116 GN=Polr1b PE=1 SV=1
Q5REE8	DNA-directed RNA polymerase I subunit RPA2 OS=Pongo abelii OX=9601 GN=POLR1B PE=2 SV=1
Q9H9Y6	DNA-directed RNA polymerase I subunit RPA2 OS=Homo sapiens OX=9606 GN=POLR1B PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04561	RNA_pol_Rpb2_2	RNA polymerase Rpb2, domain 2	Domain	Interproscan
PF04565	RNA_pol_Rpb2_3	RNA polymerase Rpb2, domain 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007642	Domain	RNA polymerase Rpb2, domain 2	Interproscan
IPR015712	Family	DNA-directed RNA polymerase, subunit 2	Interproscan
IPR007645	Domain	RNA polymerase Rpb2, domain 3	Interproscan
IPR037034	Homologous_superfamily	RNA polymerase Rpb2, domain 2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20856	DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0001054	Molecular Function	RNA polymerase I activity	Interproscan
GO:0005736	Cellular Component	RNA polymerase I complex	Interproscan
GO:0032549	Molecular Function	ribonucleoside binding	Interproscan