Detailed information of aflo_s0005.g80.t1 in Acropora florida

Genomic Location: sc0000005_pilon:2303218...2337478
NR annotation: XP_044167833.1, LOW QUALITY PROTEIN: uncharacterized protein LOC122947416 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00531DeathDeath domainDomainInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13176TPR_7Tetratricopeptide repeatRepeatInterproscan
PF00791ZU5ZU5 domainFamilyInterproscan
PF20706GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR000906DomainZU5 domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR000488DomainDeath domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR052699FamilyRegulatory & Mitotic Spindle AssociatedInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10098RAPSYN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

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