Detailed information of aflo_s0006.g50.t1 in Acropora florida

Genomic Location: sc0000006_pilon:1281187...1344707
NR annotation: XP_044173300.1, talin-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A3G2LGI8Talin OS=Oscarella pearsei OX=1940113 GN=TLN PE=1 SV=1
Q9Y4G6Talin-2 OS=Homo sapiens OX=9606 GN=TLN2 PE=1 SV=4
P54939Talin-1 OS=Gallus gallus OX=9031 GN=TLN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF08913VBSVinculin Binding SiteDomainInterproscan
PF21692Talin_R4Talin, R4 domainDomainInterproscan
PF09141Talin_middleTalin, middle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR035964Homologous_superfamilyI/LWEQ domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR037438DomainTalin-1/2, rod-segmentInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR036476Homologous_superfamilyTalin, central domain superfamilyInterproscan
IPR015009DomainVinculin-binding site-containing domainInterproscan
IPR049108DomainTalin, R4 domainInterproscan
IPR015224DomainTalin, centralInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19981TALINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0001726Cellular ComponentruffleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan

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