Gene detail

Detailed information of aflo_s0007.g81.t1 in Acropora florida

Genomic Location: sc0000007_pilon:2186844...2191300
NR annotation: XP_015751255.1, PREDICTED: microfibril-associated glycoprotein 4-like isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9U8W7	Techylectin-5B OS=Tachypleus tridentatus OX=6853 PE=1 SV=1
Q29042	Ficolin-1 OS=Sus scrofa OX=9823 GN=FCN1 PE=1 SV=1
D8VNS7	Ryncolin-1 OS=Cerberus rynchops OX=46267 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF00024	PAN_1	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10104	FCN; ficolin	-	Lectins	ko04091	deepkoala